Gene Bcen2424_4562 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_4562 
Symbol 
ID4451898 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008543 
Strand
Start bp1528506 
End bp1529402 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content62% 
IMG OID639696618 
Productextracellular solute-binding protein 
Protein accessionYP_838189 
Protein GI116692656 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCGCC GTTTCCGTTG TCTCGCCGTC GCGCTGGCCT GTGCGCTGGC CGGCGCCGCG 
CACGCGCAGG CCCTTACCGG TACGCTGAAG AAGATCAAGG ACACGGGTGT CGTGTCGCTG
GGCATTCGCG AGTCGTCGGT GCCTTTCTCG TATTCGGACA ACCAGCAGAA GAACATCGGC
TACTCGCGGG ACATCGCGTC GCGCGTCATC GACCAGTTGA AGACGGAGCT GAACCTGCCG
AACCTCGCGG TGAAGGAAAT CCCGATCACG TCGCAGAACC GCATTCCGCT GTTGCAGAAC
GGGACGATCG ACTTCGAATG CGGCTCGACG ACGAATACGC TCGAACGGCA AAGGCAGGCC
GCGTTCTCGA ACAGCATTTT TCTCTACGGC ATCCGTTTCA GCACGCGCAA GGATTCGGGC
GTGAAGGACT TCGCGGACCT GGCCGGCAAG ACGGTCGCGA CGACGGCCGG CACGTCGGAC
GAGCGCCTGC TGCGCAAGCT CAACGAAGAG AAGGCGATGA ACATGACGAT CATCAGCGCG
AAGGATCACG CCGAAGCGTT CATGAACGTC ACGACCGGGC GCGCGGTGGC GTTCGTGATG
GACGAGCCGC TGCTGTACGG CGAGATCGCG AAGGACCGCA ATCCGGGTGC GTACACGGTC
GCGGGCACGC CGCTCGTTCA CGAAAACTAT GCGTGCATGA TGCGCAGGGA CGATCCGGCG
TTCAAGCGCG TCGTCGACGG CGTGATCGCG AAGATGCAGA CCTCGGGTGC GGCCGAGAAG
CTGTACGACC AGTGGTTCAT GCGGCCGATT CCACCGAAGG GCGTGAGCCT CAACTATCCG
CTGTCGGCGG AGATGAAGCA GCTGTTCAAG AATCCGACGG ATCAGGCGCA GTACTGA
 
Protein sequence
MDRRFRCLAV ALACALAGAA HAQALTGTLK KIKDTGVVSL GIRESSVPFS YSDNQQKNIG 
YSRDIASRVI DQLKTELNLP NLAVKEIPIT SQNRIPLLQN GTIDFECGST TNTLERQRQA
AFSNSIFLYG IRFSTRKDSG VKDFADLAGK TVATTAGTSD ERLLRKLNEE KAMNMTIISA
KDHAEAFMNV TTGRAVAFVM DEPLLYGEIA KDRNPGAYTV AGTPLVHENY ACMMRRDDPA
FKRVVDGVIA KMQTSGAAEK LYDQWFMRPI PPKGVSLNYP LSAEMKQLFK NPTDQAQY