Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_4562 |
Symbol | |
ID | 4451898 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008543 |
Strand | - |
Start bp | 1528506 |
End bp | 1529402 |
Gene Length | 897 bp |
Protein Length | 298 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 639696618 |
Product | extracellular solute-binding protein |
Protein accession | YP_838189 |
Protein GI | 116692656 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATCGCC GTTTCCGTTG TCTCGCCGTC GCGCTGGCCT GTGCGCTGGC CGGCGCCGCG CACGCGCAGG CCCTTACCGG TACGCTGAAG AAGATCAAGG ACACGGGTGT CGTGTCGCTG GGCATTCGCG AGTCGTCGGT GCCTTTCTCG TATTCGGACA ACCAGCAGAA GAACATCGGC TACTCGCGGG ACATCGCGTC GCGCGTCATC GACCAGTTGA AGACGGAGCT GAACCTGCCG AACCTCGCGG TGAAGGAAAT CCCGATCACG TCGCAGAACC GCATTCCGCT GTTGCAGAAC GGGACGATCG ACTTCGAATG CGGCTCGACG ACGAATACGC TCGAACGGCA AAGGCAGGCC GCGTTCTCGA ACAGCATTTT TCTCTACGGC ATCCGTTTCA GCACGCGCAA GGATTCGGGC GTGAAGGACT TCGCGGACCT GGCCGGCAAG ACGGTCGCGA CGACGGCCGG CACGTCGGAC GAGCGCCTGC TGCGCAAGCT CAACGAAGAG AAGGCGATGA ACATGACGAT CATCAGCGCG AAGGATCACG CCGAAGCGTT CATGAACGTC ACGACCGGGC GCGCGGTGGC GTTCGTGATG GACGAGCCGC TGCTGTACGG CGAGATCGCG AAGGACCGCA ATCCGGGTGC GTACACGGTC GCGGGCACGC CGCTCGTTCA CGAAAACTAT GCGTGCATGA TGCGCAGGGA CGATCCGGCG TTCAAGCGCG TCGTCGACGG CGTGATCGCG AAGATGCAGA CCTCGGGTGC GGCCGAGAAG CTGTACGACC AGTGGTTCAT GCGGCCGATT CCACCGAAGG GCGTGAGCCT CAACTATCCG CTGTCGGCGG AGATGAAGCA GCTGTTCAAG AATCCGACGG ATCAGGCGCA GTACTGA
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Protein sequence | MDRRFRCLAV ALACALAGAA HAQALTGTLK KIKDTGVVSL GIRESSVPFS YSDNQQKNIG YSRDIASRVI DQLKTELNLP NLAVKEIPIT SQNRIPLLQN GTIDFECGST TNTLERQRQA AFSNSIFLYG IRFSTRKDSG VKDFADLAGK TVATTAGTSD ERLLRKLNEE KAMNMTIISA KDHAEAFMNV TTGRAVAFVM DEPLLYGEIA KDRNPGAYTV AGTPLVHENY ACMMRRDDPA FKRVVDGVIA KMQTSGAAEK LYDQWFMRPI PPKGVSLNYP LSAEMKQLFK NPTDQAQY
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