Gene Bcen2424_4555 details

Gene Information

• Locus tag: Bcen2424_4555
• ID: 4451891
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia cenocepacia HI2424
• Kingdom: Bacteria
• Replicon accession: NC_008543
• Strand: +
• Start bp: 1516068
• End bp: 1522178
• Gene Length: 6111 bp
• Protein Length: 2036 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 639696611
• Product: alpha-2-macroglobulin domain-containing protein
• Protein accession: YP_838182
• Protein GI: 116692649
• COG category: [R] General function prediction only
• COG ID: [COG2373] Large extracellular alpha-helical protein

Plasmid Coverage information

• Num covering plasmid clones: 1
• Plasmid unclonability p-value: 0.11517
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 9
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

GTGCAATCAA ACAGAAAGCT TCCCTCCGAG GGCAATCGAG CGATGAAGCA GCGCGACAAG 
CACAACAAAG AAACGCATCG AACCAACCAC ACGACCCGGC TGCTCTGGCG CATCGGCGCC 
GTCGCAACGC TCGGCGCCGC CGCGGCCCTG TCGCTGCATG CGGGCGCGGC GCGCACGGTG 
AGCGTGTCGC CGCAAGGCAC CGTCACCGAA GTCCGGCAGA GCGTCGTCAA GTTCGACGAA 
CCGATGGTCG CGTTCGGCTC GGCGTCCGCG CCGAATCCGG CGCGCGTGAC CTGCAACGAT 
TCGACCGCCG CGCGCGGCCA GGGCCACTGG CTCGACGACA AGACCTGGGT TTACGATTTC 
GAAAGCGACC TGCCGCCCGG CGTCCGCTGC TCGGTCGCGC TCAACGATAC GCTGCGCTCG 
GTCGCCGGCA ATGCGGCCAG CGGCCCGCGC CGCTTCACGT TCCAGACGGG CGGCCCGTTC 
CCGGTGTCGG TCCGCCCCGG CTCGCGCGAG ATCGAGGAGC GGCAGGTCTT CGTGATGAAG 
CTGAACGGCC CGGCCGAGCC GCGCTCGGCA CTCGCCAACA TCTGGTGCGA AGCGGCCGGC 
ATCGGCAACC GCATTCCGGT CACGGCGGCC GACGACGACA CGCGCAACGC CCTGCTCGAT 
CATTTCGGGC TGAAGAAAGA AGCGGCGCGC GTGCTGACGC TGTCGTGCTC GCAGGCGCTG 
CCGGCAAGCG CGAAGATGCA GCTCGTCTAC GGCAAGGGCG TCGCGAGCCC GAGCGGCATC 
GCGAACGACA CCGAGCGGCG CTTCGATTTC ACCGTGCGCG CACCGTTCGC GGCAAGCTTC 
TCGTGCGAAC GCGAGAACGC GAAGGCGCCC TGCACGCCGC TGCGCCCGCT CACGCTGTCG 
TTCAACGCAC CAGTCTCGCG CAAGCAGGCC GAAGCGATCA AGCTGCGCGG CCCCGACGGT 
TCGCTGTCGC CCACCTTCGC CGCCGACGAT CACAGCGAGG AAGTGACGAC CGTCACGTTC 
AACCCGCCGC TGCCCGCACA GGCCGCGCTG ACCGTCGAGC TGCCGTCGGG CCTGCACGAC 
GTGACCGACC GACCGCTGTC CAACGCCGAC CTGTTCCCGC TCGCGACGCG CACCGCACCG 
ATGCCGCCGC TCGCGAAATT CGCGTCGGGC ACCTTCGGGA TCGTCGAGCG CTTCGCCGAA 
CCCGGTACGC CCGCGCTGGT GCCCGTCACG CTGCGCAATG TCGAGGCCGA CCTGCATATC 
GCCGGCCTCA ATGCGGGCGG TGCGCAATTC GCGAACCTGA AGGTCGAGAA CGACACCGCG 
ATCCGCCAGT GGATGCGCAC CGTCGACCGC TTCGACAACT GGTCGATGAC GGCCGGCTCG 
ATCGACGACC AGATTCCCGG GCTGCTGCAA CGCAAGGGGC AGCACCCCGT CTACGTGCCG 
CTCGAGGCCG GCGAAAAACA GCCGGCGCCG AAGAACCGCC GCATCGACGT GCGCTCGCTG 
TCGCTGCTCG CGGGCGAGCC CGGCGCGCAG GTGCTGACGC TGCCGAAGGC CGATCCGAAG 
GCGCTGCGTC CGTTCGAAGT GGTCGGCGTG CCGATCGACA AGCCCGGCTT CTACGTGCTC 
GAACTCGCGT CGCCCGCGCT CGGCCGCTCG CTGCTCGCGA AGCCGTCGAG CATGTACGTG 
CGCACCACCG TGCTGGTCAC GAACCTCGGC GTGCACCTGA AACAGGGGCG CGAGAACAAC 
CTCGTGTGGG TCACGACGCT CGACAAGGGC AAGCCGGTGC CGAATGCGCA GATCCGCGTA 
TCGGACTGCA ACGGCGACGA AATCGCGGCC GGCAAGACCG ACGCGCAGGG CCTGCTGAAG 
ATCGACGGGC CGTTCGAGCC GAAGCGCGAA TGCAGCTCGT CGGGACAGCG CTTTAACGAC 
TACTTCGTGT CGGCCCGCGT GGACGATCCA AAGACGGGCC CCGACATGGC GTTCGTCAGC 
TCGGGCTGGA ACCGCGGGAT CGAATCGTGG CGCTTCAACG TGCCGACCGA CACCGACAGC 
GCGCCGACCG TGCGCGCACA TACGGTATTC GACCGCACGC TGCTGCGCGC CGGCGAAACC 
GTGTCGATGA AGCATTTCAT CCGCACCGAG ACGCTGCAGA GTCTCGCGTT CCCGTCGCAA 
TACCCGACGC GCGTCGCGAT CCGCCATCTC GGCACGGGCC AGACCTACAA GCTGCCGCTC 
ACGTGGGCGG CCGACCACAG CGCGGATTCG CAGTTCACGC TGCCGGCCGC CGCGAAGCTC 
GGCGAATACA GCGTCGAGCT CGAAGGCGGC CCGGACGATG CGCCGACCGC CACGTACTAC 
AGCGGCAGCT TCCGCGTCGA GGCGTTCCGC CTGCCGGTGC TGAAAGGCTC GATCGGCGCG 
CGCGACGCGC AGAAGAGCCC GCTCGTCGCC GCGAAGGAAG CGCCGCTCGC GGTGCAGATC 
GACTACGTGT CGGGCGGCGG CGCATCGAAC CTGCCGGTGC AGGTATCGGC GCTGATGAAA 
TGGGCGTCGC CGCCGTTCGC GGACCGTTTC GAGGATTTCA GCTTCACGCC GTATCGCCCC 
GACACGAGCG ACGGCAACGC CGACGACGAT GCGCAGGACG GCGACAACGC GTCGTCGTCG 
GCGTCGAGCA ACGATCCCGA CGCGACCAAG CTGATCGCCG ACAAGCTGCC GCTGACGCTC 
GACCGCAACG GCGCGGGCTC GGTCACGCTC AAGGGCCTGC CGGACGTCGA CGCGCCGAAG 
CGCATTGCGC TGGAGGCGAC GTTCGCCGAC CCGAACGGCG AAGTGCAGAC GATTCGCGGC 
GACACGATCC TGTGGCCGGC CGCGGTGGTG GCCGGCATCA AGGCCGGCCG CTGGGTGTCG 
GTCGGCCAGC GCGTGCCGGT GCAGGCGCTG GCGGTCGACC TGCAGGGCAA GCCGCGCGCG 
TCGGTGCCGA TCGAGATCAA GGGCGTCGCG CGCATCACGA CGTCGTCGCG CAAGCGGATG 
GTCGGCGGCT TCTATGCGTA CGACAACAAG AGCGACACGC GCGACCTCGG CGTGCTGTGC 
TCGGGCAAGA CCGACGACAA GGGCCGCATG GCCTGCGACG CGACGCTCGA GCAGGCCGGC 
AACGTGCAGC TGATCGCGGT CGCGAAGGAC GGCGACGGCC GCACGTCGAA TGCGTCGACG 
TCGGTATGGG TCACGCGCGA GGACGAACTC TGGTTCGGCG GCGACAACAC CGACCGGATC 
GACGTGATCC CCGAGAAAAC GTCGTACGAA CCGGGCGAAA CGGCCCGCTT CCAGGTGCGC 
ATGCCGTTCC GCTACGCGAC CGCGCTGGTG GCGGTCGAGC GCGGCGGCGT GATGGAAACG 
CACATCGTCG AACTGAACGG CAAGAACCCG ACCGTCGACC TGAAGGTCGG CGAATCGTGG 
GGGCCGAACG TCTACGTATC GGTGCTCGCG CTGCGCGGCC GGATTCGCGA GGTGCCGTGG 
TACTCGTTCT TCACGTGGGG CTGGAAGGCG CCGGTCGAAT GGGCGCGCGC GTTCTGGCGC 
GAAGGCCGCC ACTATGAAGC GCCGACCGCG TTCGTCGACC TGTCGAAGCC CGCGTTCCGC 
TATGGCCTCG GCGAGATCAA GGTCGGCACG GGCGTTCACC GCCTCGGCGT GACCGTGACG 
ACCGACGCGA CCCGCTACAC GGTACGCGGC AAGGCGCAGG CGCACGTGAA GGTCACGCTG 
CCGAACGGCC AGCCGGTGCC GGCCGGCACG CAGATCGCCC TCGCGGCCGT CGACGAGGCG 
CTGCTCGAAC TGATGCCGAA CAACAGCTGG GACCTGCTCG ACGCGATGCT GCGCCGGCGC 
GCGTACGGCG TCGAAACGGC CACCGCGCAG ATGGAAATCA TCGGCCGCCG CCACTTCGGC 
CGCAAGGCCG TGCCGGCGGG CGGCGGAGGC GGCAGCGCGC CGACCCGGGA GCTGTTCGAC 
ACGCTGCTGC TGTGGAACCC GCGCGTGACG CTCGATGCGA ACGGCAGCGC AACCGTCGAG 
GTGCCGCTGA ACGATGCGCT CACGCGCTTC CGGATCGTCG CGATCGCGGC GGTCGGCCCC 
GACCGCTTCG GCACGGGCAG CACGTCGATC CGCAGCACGC AGGATCTGCA ACTGATCTCC 
GGCCTGCCGC CGCTCGTGCG CGAAGGCGAC GCGTTCCGTG CGCAGGTCAC GCTGCGCAAC 
ACGACCGACC GCGCGATGCA GGTCGTCGTG ACGCCGCGCG TGACGGGCCT CGACGTCGCA 
CCGCAAACCG TGTCGCTGGC GGCGAACGCG GCGACCGAGG TCGCGTGGAC GATCACGGTG 
CCCGAGCAGG CGCTCGATGC GGCCGGTGCG CTGAACTGGC GCATCGAGGC GGCCGAGCAA 
GGCGGCAAGC GGGCATCCGA CGCGCTGGCC GTCGCGCAGA AGGTCGTGCC CGCGCTGCCA 
GTCACGGTGC AGCAGGCGAC GCTCGCGCAG GTCGACGGCA CGCTGACGGT GCCCGTGGCG 
GCCCCGACCG GCGCCGCGAA CAATGCGCAA GGTCTGCCGC GCGGCGGCAT CGCGGTATCG 
CTGCAGTCGA AGCTTGCCGA CGGGCTGCCC GGCGTGAAGC GCTGGTTCGA GCGCTATCCG 
TACCGCTGCC TCGAACAGCA GGCCTCGCGT GCGATCGGCC TGCGCGACCC CGCGCAATGG 
CAGGCGCTGA TCGCACGGAT GCCCGTCTAT CTCGACAGCG ACGGCCTGGC GAGCTACTTC 
CCGCCGTCGT CCGACGATTC GCACCACGGC AGCCCGACGC TGTCGTCGTA TCTCCTCGTG 
GTGTCCGACG AAGCCAGCCG TCTCGATCCG CGCTTCGCGC TGCCGGAAGA CCTGCGCACG 
CAGCTCGAAG CCGGGCTCGC GCGCTTCGTC GACGGCCGCC TCGAGCGCAA CGCGTGGGCG 
CCGCGCCAGG ATCGCGACCT GCGCAAGCTC GCGGCGATCG AGGCGCTGTC GCGCTACGGC 
GCCGCGCAGG GCCGCATGCT CGGTTCGATC GAGATCGCGC CGAACCAGTG GCCGACGTCG 
GCGGTGATCG ACTATCACGC GATCCTGACG CGCGTGAAGG ACATCCCGCA ACGCGACGAA 
AAACGCGCGC AGGTCGAACA GATCCTGCGG GCACGCCTGA CGTACCAGGG CACGCAGCTC 
GTGTTCTCGA CCGCGCGCGA CGACGACCTG TGGTGGCTGA TGACCAGCAA CGAGACCAAC 
GCCGCACGCC TCGCGCTGGA ATTCGCGGGC GACCCCGCAT GGAAGGATGA AATGCCGCGC 
GTGACGGCCG GCCTGCTCGC GCTGCAACGC CAGGGCGCCT GGCAGACGAC GACGTCGAAC 
GCGCTCGGCC TGCTCGCGGT CGAGCGCTTC TCGCGGACCT ACGAGAGCAC GCCGGTCGCC 
GGCGCGACGA AGGTTGCGCT CGGCGGCAAC GAGCGCTCGA TCTCGTGGTC GCAGACGGCA 
TCGGCCGCGC CCGCCGAGTC GCCCGCATCG GCAGCGCCGT CGGCGTCGGC CACGCCCGCG 
ACCCGCGCGG CCACCGCGCG CAGCGTGCTG ATGCCGTGGC CGCGTGCGTC GCAGGGGCCG 
GCCACGCTGT CGGTCACGCA GGACGGCACC GGCCGCCCGT GGGCGACCGT CGAAAGCCTC 
GCGGCCGTGC CGCTGCGTGC GCCGTTTGCT GCCGGCTACC GGATCACGAA GACCGTCACG 
CCCGTGTCGC CGGCCGTCAA CGGCGTGCTG ACGCGCGGCG ACGTCGTGCG CGTGCATCTC 
GACATCGATG CGCAGAGCGA CATGACGTGG GTCGCCGTCA ACGATCCGAT CCCGGCCGGT 
GCGACGATCC TCGGGTCGGG CCTCGGCCGC GATTCCGAAG CCGCGACGCA GGGCGAGAAA 
ACGCCGGACG GCGCGTGGCC GGCGTTCATC GAGCGCGACT TCGACGGCTA TCGCGCGTAC 
TACGACTATT TGCCGAAGGG CAAATTCTCG GTGGAGTACA CGGTACGGCT GAACAACGTC 
GGCACGTTCG GCCTGCCGCC GACGCGCGTC GAGGCACTGT ATGCGCCGTC CGTGTACGGC 
CTGTGGCCGA ACCCGCCGAT GACCGTGAAG CCGGCCGACT CGGGCAAGTA A 

 

Protein sequence

MQSNRKLPSE GNRAMKQRDK HNKETHRTNH TTRLLWRIGA VATLGAAAAL SLHAGAARTV 
SVSPQGTVTE VRQSVVKFDE PMVAFGSASA PNPARVTCND STAARGQGHW LDDKTWVYDF 
ESDLPPGVRC SVALNDTLRS VAGNAASGPR RFTFQTGGPF PVSVRPGSRE IEERQVFVMK 
LNGPAEPRSA LANIWCEAAG IGNRIPVTAA DDDTRNALLD HFGLKKEAAR VLTLSCSQAL 
PASAKMQLVY GKGVASPSGI ANDTERRFDF TVRAPFAASF SCERENAKAP CTPLRPLTLS 
FNAPVSRKQA EAIKLRGPDG SLSPTFAADD HSEEVTTVTF NPPLPAQAAL TVELPSGLHD 
VTDRPLSNAD LFPLATRTAP MPPLAKFASG TFGIVERFAE PGTPALVPVT LRNVEADLHI 
AGLNAGGAQF ANLKVENDTA IRQWMRTVDR FDNWSMTAGS IDDQIPGLLQ RKGQHPVYVP 
LEAGEKQPAP KNRRIDVRSL SLLAGEPGAQ VLTLPKADPK ALRPFEVVGV PIDKPGFYVL 
ELASPALGRS LLAKPSSMYV RTTVLVTNLG VHLKQGRENN LVWVTTLDKG KPVPNAQIRV 
SDCNGDEIAA GKTDAQGLLK IDGPFEPKRE CSSSGQRFND YFVSARVDDP KTGPDMAFVS 
SGWNRGIESW RFNVPTDTDS APTVRAHTVF DRTLLRAGET VSMKHFIRTE TLQSLAFPSQ 
YPTRVAIRHL GTGQTYKLPL TWAADHSADS QFTLPAAAKL GEYSVELEGG PDDAPTATYY 
SGSFRVEAFR LPVLKGSIGA RDAQKSPLVA AKEAPLAVQI DYVSGGGASN LPVQVSALMK 
WASPPFADRF EDFSFTPYRP DTSDGNADDD AQDGDNASSS ASSNDPDATK LIADKLPLTL 
DRNGAGSVTL KGLPDVDAPK RIALEATFAD PNGEVQTIRG DTILWPAAVV AGIKAGRWVS 
VGQRVPVQAL AVDLQGKPRA SVPIEIKGVA RITTSSRKRM VGGFYAYDNK SDTRDLGVLC 
SGKTDDKGRM ACDATLEQAG NVQLIAVAKD GDGRTSNAST SVWVTREDEL WFGGDNTDRI 
DVIPEKTSYE PGETARFQVR MPFRYATALV AVERGGVMET HIVELNGKNP TVDLKVGESW 
GPNVYVSVLA LRGRIREVPW YSFFTWGWKA PVEWARAFWR EGRHYEAPTA FVDLSKPAFR 
YGLGEIKVGT GVHRLGVTVT TDATRYTVRG KAQAHVKVTL PNGQPVPAGT QIALAAVDEA 
LLELMPNNSW DLLDAMLRRR AYGVETATAQ MEIIGRRHFG RKAVPAGGGG GSAPTRELFD 
TLLLWNPRVT LDANGSATVE VPLNDALTRF RIVAIAAVGP DRFGTGSTSI RSTQDLQLIS 
GLPPLVREGD AFRAQVTLRN TTDRAMQVVV TPRVTGLDVA PQTVSLAANA ATEVAWTITV 
PEQALDAAGA LNWRIEAAEQ GGKRASDALA VAQKVVPALP VTVQQATLAQ VDGTLTVPVA 
APTGAANNAQ GLPRGGIAVS LQSKLADGLP GVKRWFERYP YRCLEQQASR AIGLRDPAQW 
QALIARMPVY LDSDGLASYF PPSSDDSHHG SPTLSSYLLV VSDEASRLDP RFALPEDLRT 
QLEAGLARFV DGRLERNAWA PRQDRDLRKL AAIEALSRYG AAQGRMLGSI EIAPNQWPTS 
AVIDYHAILT RVKDIPQRDE KRAQVEQILR ARLTYQGTQL VFSTARDDDL WWLMTSNETN 
AARLALEFAG DPAWKDEMPR VTAGLLALQR QGAWQTTTSN ALGLLAVERF SRTYESTPVA 
GATKVALGGN ERSISWSQTA SAAPAESPAS AAPSASATPA TRAATARSVL MPWPRASQGP 
ATLSVTQDGT GRPWATVESL AAVPLRAPFA AGYRITKTVT PVSPAVNGVL TRGDVVRVHL 
DIDAQSDMTW VAVNDPIPAG ATILGSGLGR DSEAATQGEK TPDGAWPAFI ERDFDGYRAY 
YDYLPKGKFS VEYTVRLNNV GTFGLPPTRV EALYAPSVYG LWPNPPMTVK PADSGK