Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_4553 |
Symbol | |
ID | 4451889 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008543 |
Strand | - |
Start bp | 1513674 |
End bp | 1515293 |
Gene Length | 1620 bp |
Protein Length | 539 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639696609 |
Product | glucose-methanol-choline oxidoreductase |
Protein accession | YP_838180 |
Protein GI | 116692647 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.940882 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGATA CCGATACGCA AAAAGCCGAC ATCGTCGTCG TCGGATCGGG TGTCGCCGGC GCGATCGTTG CACACCAGCT CGCGATGGCG GGCAAGTCCG TGATCCTGCT GGAAGCCGGC CCGCGCATGC CGCGCTGGGA AATCGTCGAG CGCTTTCGCA ACCAGGCCGA CAAGACCGAT TTCATGGCGC CGTACCCGTC GAGCCCGTGG GCCCCGCATC CGGAATACGG CCCGCCGAAC GACTACCTGG TCCTGAAGGG CGAGCACAAG TTCAACTCGC AGTACATCCG CGCGGTCGGC GGCACGACGT GGCACTGGGC CGCGTCCGCG TGGCGCTTCA TCCCGAACGA CTTCAAGATG AAGACCGTGT ACGGCGTCGG CCGCGACTGG CCGATCCAGT ACGACGACCT CGAGCATTAC TATCAGCGCG CCGAGGAAGA GCTCGGCGTG TGGGGCCCGG GCCCCGAGGA AGACCTGTAC TCGCCGCGCA AGCAGGCGTA CCCGATGCCG CCGCTGCCGT TGTCGTTCAA CGAGCAGACC ATCAAGAGCG CGCTGAACGG CTACGACCCG AAGTTCCACG TGGTGACCGA GCCCGTCGCG CGTAACAGCC GCCCGTACGA CGGCCGGCCG ACCTGTTGCG GAAACAACAA TTGCATGCCG ATCTGCCCGA TCGGTGCGAT GTACAACGGT ATCGTCCACG TCGAGAAGGC CGAGCAGGCC GGCGCGAAGC TGATCGACAG CGCGGTCGTC TACAAGCTCG AGACCGGGCC GGACAAGCGC ATCACCGCCG CGATCTACAA GGACAAGACG GGTGCCGACC ATCGCGTCGA AGGCAAGTAT TTCGTCATTG CCGCGAACGG CATCGAGACG CCGAAGATCC TGCTGATGTC CGCGAACCGC GATTTCCCGA ACGGCGTCGC GAACAGCTCC GACATGGTCG GCCGCAACCT GATGGACCAT CCGGGCACCG GCGTGTCGTT CTATGCGAGC GAGAAACTGT GGCCGGGCCG CGGCCCGCAG GAGATGACGT CGCTGATCGG TTTCCGCGAC GGCCCGTTCC GCGCGACCGA AGCCGCGAAG AAGATCCACC TGTCGAACAT GTCGCGCATC AACCAGGAGA CGCAGAAGAT CTTCAAGGCC GGCAAGCTGA TGAAGCACGA CGAGCTCGAC GCGCAGATCC GCGACCGTTC CGCACGCTAC GTGCAGTTCG ACTGCTTCCA CGAGATCCTG CCGCAACCCG AGAACCGCAT CGTGCCGAGC AAGACGGCCA CCGACGCGAT CGGCATCCCG CGCCCCGAGA TCACGTATGC GATCGACGAT TACGTGAAGC GCGGCGCCGT GCATACGCGC GAGGTCTACG CGACCGCCGC GAAGGTGCTC GGCGGCACCG ACGTCGTCTT CAACGACGAG TTCGCGCCGA ACAACCACAT CACGGGCGCG ACGATCATGG GCGCGGACGC ACGCGACTCG GTCGTCGACA AGGACTGCCG CACGTTCGAC CATCCGAACC TGTTCATCTC GAGCAGTTCG ACGATGCCGA CCGTCGGTAC GGTGAACGTG ACGCTGACGA TCGCGGCGCT CGCGCTGCGG ATGTCGGACA CGCTGAAGAA GGAAGTCTGA
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Protein sequence | MADTDTQKAD IVVVGSGVAG AIVAHQLAMA GKSVILLEAG PRMPRWEIVE RFRNQADKTD FMAPYPSSPW APHPEYGPPN DYLVLKGEHK FNSQYIRAVG GTTWHWAASA WRFIPNDFKM KTVYGVGRDW PIQYDDLEHY YQRAEEELGV WGPGPEEDLY SPRKQAYPMP PLPLSFNEQT IKSALNGYDP KFHVVTEPVA RNSRPYDGRP TCCGNNNCMP ICPIGAMYNG IVHVEKAEQA GAKLIDSAVV YKLETGPDKR ITAAIYKDKT GADHRVEGKY FVIAANGIET PKILLMSANR DFPNGVANSS DMVGRNLMDH PGTGVSFYAS EKLWPGRGPQ EMTSLIGFRD GPFRATEAAK KIHLSNMSRI NQETQKIFKA GKLMKHDELD AQIRDRSARY VQFDCFHEIL PQPENRIVPS KTATDAIGIP RPEITYAIDD YVKRGAVHTR EVYATAAKVL GGTDVVFNDE FAPNNHITGA TIMGADARDS VVDKDCRTFD HPNLFISSSS TMPTVGTVNV TLTIAALALR MSDTLKKEV
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