Gene Bcen2424_4553 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_4553 
Symbol 
ID4451889 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008543 
Strand
Start bp1513674 
End bp1515293 
Gene Length1620 bp 
Protein Length539 aa 
Translation table11 
GC content65% 
IMG OID639696609 
Productglucose-methanol-choline oxidoreductase 
Protein accessionYP_838180 
Protein GI116692647 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2303] Choline dehydrogenase and related flavoproteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.940882 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGATA CCGATACGCA AAAAGCCGAC ATCGTCGTCG TCGGATCGGG TGTCGCCGGC 
GCGATCGTTG CACACCAGCT CGCGATGGCG GGCAAGTCCG TGATCCTGCT GGAAGCCGGC
CCGCGCATGC CGCGCTGGGA AATCGTCGAG CGCTTTCGCA ACCAGGCCGA CAAGACCGAT
TTCATGGCGC CGTACCCGTC GAGCCCGTGG GCCCCGCATC CGGAATACGG CCCGCCGAAC
GACTACCTGG TCCTGAAGGG CGAGCACAAG TTCAACTCGC AGTACATCCG CGCGGTCGGC
GGCACGACGT GGCACTGGGC CGCGTCCGCG TGGCGCTTCA TCCCGAACGA CTTCAAGATG
AAGACCGTGT ACGGCGTCGG CCGCGACTGG CCGATCCAGT ACGACGACCT CGAGCATTAC
TATCAGCGCG CCGAGGAAGA GCTCGGCGTG TGGGGCCCGG GCCCCGAGGA AGACCTGTAC
TCGCCGCGCA AGCAGGCGTA CCCGATGCCG CCGCTGCCGT TGTCGTTCAA CGAGCAGACC
ATCAAGAGCG CGCTGAACGG CTACGACCCG AAGTTCCACG TGGTGACCGA GCCCGTCGCG
CGTAACAGCC GCCCGTACGA CGGCCGGCCG ACCTGTTGCG GAAACAACAA TTGCATGCCG
ATCTGCCCGA TCGGTGCGAT GTACAACGGT ATCGTCCACG TCGAGAAGGC CGAGCAGGCC
GGCGCGAAGC TGATCGACAG CGCGGTCGTC TACAAGCTCG AGACCGGGCC GGACAAGCGC
ATCACCGCCG CGATCTACAA GGACAAGACG GGTGCCGACC ATCGCGTCGA AGGCAAGTAT
TTCGTCATTG CCGCGAACGG CATCGAGACG CCGAAGATCC TGCTGATGTC CGCGAACCGC
GATTTCCCGA ACGGCGTCGC GAACAGCTCC GACATGGTCG GCCGCAACCT GATGGACCAT
CCGGGCACCG GCGTGTCGTT CTATGCGAGC GAGAAACTGT GGCCGGGCCG CGGCCCGCAG
GAGATGACGT CGCTGATCGG TTTCCGCGAC GGCCCGTTCC GCGCGACCGA AGCCGCGAAG
AAGATCCACC TGTCGAACAT GTCGCGCATC AACCAGGAGA CGCAGAAGAT CTTCAAGGCC
GGCAAGCTGA TGAAGCACGA CGAGCTCGAC GCGCAGATCC GCGACCGTTC CGCACGCTAC
GTGCAGTTCG ACTGCTTCCA CGAGATCCTG CCGCAACCCG AGAACCGCAT CGTGCCGAGC
AAGACGGCCA CCGACGCGAT CGGCATCCCG CGCCCCGAGA TCACGTATGC GATCGACGAT
TACGTGAAGC GCGGCGCCGT GCATACGCGC GAGGTCTACG CGACCGCCGC GAAGGTGCTC
GGCGGCACCG ACGTCGTCTT CAACGACGAG TTCGCGCCGA ACAACCACAT CACGGGCGCG
ACGATCATGG GCGCGGACGC ACGCGACTCG GTCGTCGACA AGGACTGCCG CACGTTCGAC
CATCCGAACC TGTTCATCTC GAGCAGTTCG ACGATGCCGA CCGTCGGTAC GGTGAACGTG
ACGCTGACGA TCGCGGCGCT CGCGCTGCGG ATGTCGGACA CGCTGAAGAA GGAAGTCTGA
 
Protein sequence
MADTDTQKAD IVVVGSGVAG AIVAHQLAMA GKSVILLEAG PRMPRWEIVE RFRNQADKTD 
FMAPYPSSPW APHPEYGPPN DYLVLKGEHK FNSQYIRAVG GTTWHWAASA WRFIPNDFKM
KTVYGVGRDW PIQYDDLEHY YQRAEEELGV WGPGPEEDLY SPRKQAYPMP PLPLSFNEQT
IKSALNGYDP KFHVVTEPVA RNSRPYDGRP TCCGNNNCMP ICPIGAMYNG IVHVEKAEQA
GAKLIDSAVV YKLETGPDKR ITAAIYKDKT GADHRVEGKY FVIAANGIET PKILLMSANR
DFPNGVANSS DMVGRNLMDH PGTGVSFYAS EKLWPGRGPQ EMTSLIGFRD GPFRATEAAK
KIHLSNMSRI NQETQKIFKA GKLMKHDELD AQIRDRSARY VQFDCFHEIL PQPENRIVPS
KTATDAIGIP RPEITYAIDD YVKRGAVHTR EVYATAAKVL GGTDVVFNDE FAPNNHITGA
TIMGADARDS VVDKDCRTFD HPNLFISSSS TMPTVGTVNV TLTIAALALR MSDTLKKEV