Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_4550 |
Symbol | |
ID | 4451886 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008543 |
Strand | - |
Start bp | 1510631 |
End bp | 1511737 |
Gene Length | 1107 bp |
Protein Length | 368 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639696606 |
Product | porin |
Protein accession | YP_838177 |
Protein GI | 116692644 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3203] Outer membrane protein (porin) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.537681 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCGACTCA AATACTTCGC ATGGCTGATT GCGGCCGCCA CGCCGGCGGC TGCGTTTGCA CAGACGAGCG TCACGCTGTA CGGCCGGATC GACGGCGGCG TCGAATACCT GAACCACATC GCGAAGCCGA ACGGTGGCAG CGGGACGCGC TGGAGCGCGG AAAGCGGCGA CTGGGGCACC AGCATGTTCG GGCTGAAGGG CGTCGAGGAT CTCGGCGGCG GCCTGTCGAC GGTGTTCAAC CTGGAAACCG CGTTCCAGGT GATGAACGGC CAGACGGGCG GCGGGCGCAT GTGGTCACGG CGCGCATACG TCGGGTTGAA GAGCAACACG TGGGGCCAAT TGCAGGCCGG CCGCAACCTG TTCATCGACA GCGACGGCGT GTGGGAATTC GATCCGTTCG TCCAGCAGGC GTTTTCGTCG GCGTCGCTCG TGCGTGGCCG CAACTGGCAG CAGACCAGCA ACAACATCGA ATATCACAGC CCGGTGATCG GCGGCTTCGA CGTGCAGGCG CAATACGCGT TCGGCAACCA GTCGCGCGGC TTCAACTACG GCGCGCCCGA CGATTTCGGC CGCTCGGACG GGATCATGAT CTCGTACCAC TCGCCGGTGC TCGACGTGCG CGGCATCTAC GACGAGCTGC GCGACAACAA CGGCAAGTTC AGCAACGTCT TCACGGCGTC GCGCGAGTAC TTCGTCGGTG CGAACGTGAA GGTGTCGAAG TTCAAGATCC AGGGGGCGTA TACGCACTAC CAGGCGCCGG ATAGTCCGGC TGGTGTTGCC GATCGTGCCG ATCACTACTG GCTCGGCGCA ACCTACTCGG CGACGCCGCA GTGGGCGGTG ACGGGGGGCG GGTATTACGT GAAGGTCGGC GACGGCGGCG GCGATGCGTC GCACGATCCG TCGGGGCACG CGATGATGTA CGTGCTCGGT ACCACGTACA ATCTGTCGAA ACGTACGTTC CTGTATGGGA CGGTTGCGTA TGTGCGCAAC GGCGGGAATT CGAACTTCTC GCTGCTCGCG ACGCCGCGGG ATGCGACGTC GGGGACGAGC CCGATGACAG GCGAGTCGCA GACGGGCGCG TATGTGGGGA TGATGCATAC GTTCTGA
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Protein sequence | MRLKYFAWLI AAATPAAAFA QTSVTLYGRI DGGVEYLNHI AKPNGGSGTR WSAESGDWGT SMFGLKGVED LGGGLSTVFN LETAFQVMNG QTGGGRMWSR RAYVGLKSNT WGQLQAGRNL FIDSDGVWEF DPFVQQAFSS ASLVRGRNWQ QTSNNIEYHS PVIGGFDVQA QYAFGNQSRG FNYGAPDDFG RSDGIMISYH SPVLDVRGIY DELRDNNGKF SNVFTASREY FVGANVKVSK FKIQGAYTHY QAPDSPAGVA DRADHYWLGA TYSATPQWAV TGGGYYVKVG DGGGDASHDP SGHAMMYVLG TTYNLSKRTF LYGTVAYVRN GGNSNFSLLA TPRDATSGTS PMTGESQTGA YVGMMHTF
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