Gene Bcen2424_4484 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_4484 
Symbol 
ID4452638 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008543 
Strand
Start bp1435027 
End bp1435992 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content66% 
IMG OID639696540 
Producthypothetical protein 
Protein accessionYP_838111 
Protein GI116692578 
COG category[E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0697] Permeases of the drug/metabolite transporter (DMT) superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGAAAC AGGCAGCAAG CATGAAACGC AAGAACAAGG CAACGCTCGT CGGGCTCGGC 
GCGGTGCTGT TATGGGCGTC GGTGGTCGCG CTCGTGCGCG GCGTCAGCGA AAGCCTCGGC
GCGACCGGCG GCGCGGCGAT GATCTATACG GTGGCGTCCG TGCTGCTGCT GTTCTCGATC
GGCTTCCCCG ACCTGAGCCG CTTCCCGAAA AGCTATCTGC TCTGGGGCGG GCTGCTGTTC
GTGTCGTACG AGCTGTGCCT GGCGCTGTCG ATCGGCTATG CGAGCAACGG TCGGCAAGCG
ATCGAAGTCG CGATGGTCAA CTATCTGTGG CCGAGCCTTA CGTTGGTCGC CGCCATCGTG
TTCAACCGGC AGCGTGCGAA CCTGCTGGTC GTGCCGGGCG TCCTGCTGTC GATGCTCGGC
ATCTGCTGGG TGCTCGGCGG CGACCAGGGG CTCGATCCCG CCGGCATGCT GCGCAACGTC
GCGGACAATC CGCTGAGCTA CGGCCTGGCA TTGTTCGGCG CGCTGATCTG GGCTGCCTAT
TGCACGGTGA CCGCGCGCAT CGCCAACGGC AAGAACGGCG TCACGCCGTT CTTCATGCTG
GTCGCCGCGG TGCTCTGGAT CAAGTTCGCG ATCGAAGGCG GCGGCGGCAT GACGTTCAGT
TTTCGCGCGA TCGTGTATCT CGTGCTGGCG GCGTCGGCGC TCGGCTTCGG CTACGCAGCC
TGGAACACCG GCATCATGCA CGGCAACGTG ACGGTCATCG TCGGCGCATC GTACTTCACG
CCGGTGCTCG CCGCCGCCCT CGCCGCCACG CTGCTGCATG CGCCGCTGTC GATCGAATTC
TGGCAAGGCG CATCGATGGT GTGCGGCGGC TCGATCCTGT GCTGGCTCGC GACGCGCAGC
CGGCGTCGTG ACGAGGCCGA GCCCGTGCCG ATCGGTAAGG AAACCGAAGG TAACTGCCAC
GGATAA
 
Protein sequence
MLKQAASMKR KNKATLVGLG AVLLWASVVA LVRGVSESLG ATGGAAMIYT VASVLLLFSI 
GFPDLSRFPK SYLLWGGLLF VSYELCLALS IGYASNGRQA IEVAMVNYLW PSLTLVAAIV
FNRQRANLLV VPGVLLSMLG ICWVLGGDQG LDPAGMLRNV ADNPLSYGLA LFGALIWAAY
CTVTARIANG KNGVTPFFML VAAVLWIKFA IEGGGGMTFS FRAIVYLVLA ASALGFGYAA
WNTGIMHGNV TVIVGASYFT PVLAAALAAT LLHAPLSIEF WQGASMVCGG SILCWLATRS
RRRDEAEPVP IGKETEGNCH G