Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_4473 |
Symbol | |
ID | 4451981 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008543 |
Strand | + |
Start bp | 1425857 |
End bp | 1427053 |
Gene Length | 1197 bp |
Protein Length | 398 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 639696529 |
Product | phage integrase family protein |
Protein accession | YP_838100 |
Protein GI | 116692567 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0169641 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCTCAT CCGCCTCGTC CGACACCGCG CTGCGCCCGC TGCCGATCGA TACGCTCGTC GTGCCGGCCG TGCTCGACGG ACGCACGGGC ACCAATCGCT CGGGCAGCGC GCATCCGCAG ATCGCCGCGA CCAACGACCT CGACGCGGTG CGCGCGTGGC TCGCGCGCTT CGTCGATACG CCGACCACGT TCCAGAACTA CCGCAAGGAA GCCGAGCGCC TGCTGCTGTG GGCCGTGATC GCGTGCGGCA AGCCGCTGTC GTCGCTCACG CACGAGGATC TCGTCGTCTA CCGGCAATTC CTGCTCGCGC CCGCGCCGGC CGAGCTGTGG TGCGCGAACG GCGGCCGCAA GCATCCGCGC GACGATCCGC GCTGGCGGCC GTTCTACGGG CCGCTGTCGG CAGCCAGCCA GCGGCAGGCG CTGGTGATCC TGAACGTGAT GTTCTCGTGG CTCGTGCAGG CCGGCTATCT GGCCGGCAAC CCGCTCGCGT TGTCGCGACA GCGGCAGCGC CGGCCCGCCC CGCGCGTCAC GCGCCATCTC GGGCAGCCGC TGTGGCAATC GGTGAAGGAC GCGATCGCCG CGATGCCGCG CGACGATGCG CGCGCGTGCT TCCATGCTGA TCGCGCGCGC TGGCTCTTCA CGCTGCTGTA TCTCGGCGGG CTGCGCATCA CCGAGGCGGC CGATACGACG ATGGGGCAAT TCTTCTGCCG GCGCGATGCG AACGGGCACG AGCGCTGGTG GCTCGACGTG ACGGGCAAAG GCGGCCGGCA GCGGCTCGTG CCGGCCACCG ACGAGATGAT GGCCGAGCTG ACGCGCTACC GGCGCACGCA CGGCCTGCCC GCGCTACCGC TCGACGGCGA GCCGACCCCG CTCGTGCTGC CGTTCGGTCA GGCGCGCAAG CCGCTCACGC GCGCGGCGCT GCACCGCATC GTGAAGCAGG TGTTCCGGCA CGCGGCCGGC CGGCTGCGCG CGAACGGCGA AACCGGCGAG CAGGCGGCGC GCGTGCTCGA ACAGGCGTCC GCGCACTGGC TGCGCCACAG CGCGGGCTCG CACATGGCCG ACGGCCGCGT CGACCTGCGG CTCGTGCGCG ACAACCTCGG CCATGTATCG CTCACGACGA CGAGTCAGTA TCTTCATGCG GACGACGACT GGCGCCATCG CGAGACGGAG GAGAAGCACC GGATCGGGTG GGACTAG
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Protein sequence | MTSSASSDTA LRPLPIDTLV VPAVLDGRTG TNRSGSAHPQ IAATNDLDAV RAWLARFVDT PTTFQNYRKE AERLLLWAVI ACGKPLSSLT HEDLVVYRQF LLAPAPAELW CANGGRKHPR DDPRWRPFYG PLSAASQRQA LVILNVMFSW LVQAGYLAGN PLALSRQRQR RPAPRVTRHL GQPLWQSVKD AIAAMPRDDA RACFHADRAR WLFTLLYLGG LRITEAADTT MGQFFCRRDA NGHERWWLDV TGKGGRQRLV PATDEMMAEL TRYRRTHGLP ALPLDGEPTP LVLPFGQARK PLTRAALHRI VKQVFRHAAG RLRANGETGE QAARVLEQAS AHWLRHSAGS HMADGRVDLR LVRDNLGHVS LTTTSQYLHA DDDWRHRETE EKHRIGWD
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