| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_4423 |
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| Symbol | |
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| ID | 4451405 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia HI2424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008543 |
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| Strand | + |
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| Start bp | 1369457 |
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| End bp | 1371007 |
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| Gene Length | 1551 bp |
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| Protein Length | 516 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 639696479 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_838050 |
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| Protein GI | 116692517 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGTCA GGGCGGCTCT CCTGAACTCC GTTCTCGCCA CTCCCCCCTC CGGCAACCAC
CGCGTGACGG CCGCGCTGCG TCCGTCGATG CTCGTGACGC TGTTCGAGGA CGTGCGCCCG
ATGGCGCTGT CCGGGCTCGC GAGCGGCTTC GTCGCGGCCG TCGCGCTGAT CCGGCTGCAG
CAGCTGTGGT GCCTCGCGTG GCTCGTCGTC GACGTCGGCC TGCTCATTGC GCGCCTGTCG
ATCGCACGGG CCTACACGGT ACGGCGCAAC GCCGGCGACG ATCGCGCCGA ATACTGGGCG
AAGCGCTATG CGCCGGTGTC GCTCGTTGCC TGCTTCGTGC TCGGCCTCGG CGTGATGGGC
TGCGTGCAGG CCACCGACGT CGAACTCGGC ACGCTGTCCG TGATGGTCGC AGGCGGCGTG
TTCGGCGGGA TCGCGTCGCG CAATTCGGCG CTGCCGCGGC TCGCGATGAC GCAGGTCGTG
CTCGGCGTGC TGCCGATCGG CGTCGGTGCG CTGCTGGCCC CTCGGCCGGG TGCCTGGCTG
CTGGTGCCGC CGCTCGCGAT CTATCTCGCG GCAATGCGCA CGGTCGTCCA GCGCCACTAC
CGCGTGCTCG TCGCGCTGAT CGCCGCGCGC CAGCGCAACG CCGAACTCGT CGCCCGCTTC
GACGCCGCCC TCACCTACAT GCCGCACGGC CTGTGCATGA TCGACGGCGA CAGCCGCGTG
ATCGTCGCGA ACCGTCGGAC CGCGCAACTG TTCGGCTCGC CGCGCGAGAT CATGCTCGAT
ACGCCGTTGC CCGCCGTGGT CGCCGCGCTC GGCACCGATG CCGTGATCGA TCCCGGCGGC
GCCGGCCTCG CCGCGCAGTG CGACAGCTGG CTGAGCCGCC ACGAACCCGG GCCGCTCGAC
ATCGCGCTCG CCGACGGCCG CCAGCTCGAA CTGACGCGCC ACCGCGTGCC GGACGGCAAC
GCGGTGATCA TCGTCGAGGA CGTCACCACA CGCCGTCAGA CTGAACAGCA CATCCGGCAC
CTCGCGCGAC ACGACGCGCT GACGGGGCTG CCGAATCGCC ACGAACTGCA CGCCGAGCTC
AAGCGAATGC TCGCGCGCCG GCCGCGGCTG CCGAGCCCGG CATTCGCCGT CATGTATCTC
GACCTCGACG GTTTCAAGTC GATCAACGAC CGCTTCGGCC ACCAGGCCGG CGACGAAGTG
CTCACGCAAG TCGCCGAGCG GCTCGGCAAG ACGCTGCCGC CGGGCGAGCT CGCCGCGCGC
ATCGGCGGCG ACGAATTCAT CGTCGCGATC GACGACACGA CGATGCAAGC GTGCTCGATC
CTCGCCGCGC GGATCATCCG GCAGATTTCG GCGCCGTACG CGCTGTCGAT CGGCGAGACC
GTCTGCATCG GTATCAGCAT CGGCATCGCG CTCGACGACG GGCACGGCTC GCCCGACGAG
CTGATCCGGC AGGCCGACAG CGCGCTGTAC GACGCGAAGT CGGCCGGCAA GGGCATCTAC
TGCTTCTACT CGAGCGGCAG CCGCCGCATG GCGCCGGCCG CCGCCAGTTG A
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| Protein sequence | MAVRAALLNS VLATPPSGNH RVTAALRPSM LVTLFEDVRP MALSGLASGF VAAVALIRLQ
QLWCLAWLVV DVGLLIARLS IARAYTVRRN AGDDRAEYWA KRYAPVSLVA CFVLGLGVMG
CVQATDVELG TLSVMVAGGV FGGIASRNSA LPRLAMTQVV LGVLPIGVGA LLAPRPGAWL
LVPPLAIYLA AMRTVVQRHY RVLVALIAAR QRNAELVARF DAALTYMPHG LCMIDGDSRV
IVANRRTAQL FGSPREIMLD TPLPAVVAAL GTDAVIDPGG AGLAAQCDSW LSRHEPGPLD
IALADGRQLE LTRHRVPDGN AVIIVEDVTT RRQTEQHIRH LARHDALTGL PNRHELHAEL
KRMLARRPRL PSPAFAVMYL DLDGFKSIND RFGHQAGDEV LTQVAERLGK TLPPGELAAR
IGGDEFIVAI DDTTMQACSI LAARIIRQIS APYALSIGET VCIGISIGIA LDDGHGSPDE
LIRQADSALY DAKSAGKGIY CFYSSGSRRM APAAAS
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