Gene Bcen2424_4398 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_4398 
Symbol 
ID4453163 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008543 
Strand
Start bp1342772 
End bp1343437 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content72% 
IMG OID639696454 
Productcation efflux protein 
Protein accessionYP_838025 
Protein GI116692492 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0053] Predicted Co/Zn/Cd cation transporters 
TIGRFAM ID[TIGR01297] cation diffusion facilitator family transporter 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.800108 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCGCC CGTCGCGCAC CACGCCCCAC GTTTACGCAG CCACGTCCCG CGCCCTCGCC 
GTCAGCCTCG CGATCAACCT GCTGCTGCTC GCCGTCGAGA CGGCGGCGGC ATGGTCCGCG
CATTCGTCGG GGTTGCTCGC GGACGTCGCA CACGCCGCGA TCGACTTGGC GGCCGATGCG
CTGATCCTCG TCGCCTGTCG GCTCGACGCG CGCTTGCCGC CGGCACGTCG GCCGACTTAC
GAGCCGCTCG CGCTCGCGGG CCTCGGTGCG TTGCTGGCCG TAACCGGCGC GCAGATGATC
TGGCATGCAA CGACCCGGTT CGATACGCCA CCCGTCGTGC AGCCGGGCGC GACCGCGCTC
GCGCTGGTTG CCGTCACACT CGCCGGCAAG GCCGTGCTGT CGTACTGGAT GCTGCGCAAG
GCACGCGAGA CCGGCTCCGC GCTGCTCGAG GCAAGCGGCT GGCACGTGCG GACCGATGCG
CTGTCGTCGT TGCTCGCGGC GCTCGCGATG AGTGCGGCGC TGGTCGGCTT CGGCCGGCTG
GACGATCTGG CCGCGTTCGC GATCGGCGCG CTCGTGATTC GCACGGGTGT CGGATTCATC
CGGCGCGGCT GTGCGCAGTG GCCGGCACGG GCCGATTGGG CGAATCGCTC GACGCGCGGG
TCGTGA
 
Protein sequence
MQRPSRTTPH VYAATSRALA VSLAINLLLL AVETAAAWSA HSSGLLADVA HAAIDLAADA 
LILVACRLDA RLPPARRPTY EPLALAGLGA LLAVTGAQMI WHATTRFDTP PVVQPGATAL
ALVAVTLAGK AVLSYWMLRK ARETGSALLE ASGWHVRTDA LSSLLAALAM SAALVGFGRL
DDLAAFAIGA LVIRTGVGFI RRGCAQWPAR ADWANRSTRG S