Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_4389 |
Symbol | |
ID | 4451577 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008543 |
Strand | + |
Start bp | 1331864 |
End bp | 1334164 |
Gene Length | 2301 bp |
Protein Length | 766 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639696445 |
Product | helicase c2 |
Protein accession | YP_838016 |
Protein GI | 116692483 |
COG category | [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG1199] Rad3-related DNA helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.787433 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.56553 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCTACG TCGTCGCGGT GCGGGCGATG TGCGAGTTCA CCGCGCGGCG CGGCGATCTC GACCTGCGCT TCACGCCCGC GCCGACCGCG CTCGAAGGCA TCGCCGGCCA CGGCGCGGTC ACGTCGAAGC GTGGCGCACG CTACGAAACC GAGATCGCGC TGACCGGCAC GTGGGGCACG CTCACCGTGC GCGGCCGCGC GGACGGCTAC GATCCCGTGG CGAACCGGCT CGAGGAAATC AAGACCTATC GCGGCAGTCT CGACGCGATG CCGGCCAACC ATCGCGCGCT GCACTGGGCG CAGGCGAAGG TCTATGCGCA CCTGATGTGC GATGCGCGCG ACCTCAAGGA AATCAACGTC GCGCTCGTGT ATTTCGACAT CGTGTCCGAG CGCGAGACCG TGCTGACGGA AACGCTGGAT GCCGGCACGC TCGCGACGTT CTTCGCCGAA CAGTGCGCAT GCTTCGTCGG CTGGGCCGAA CGCGAGACGG CCCATCGCGC CGCCCGCGAC GCGGCGCTGC GTGCGCTCGC GTTTCCGCAC GGGCAGTTCC GCAGCGGCCA GCGCGAGCTG GCGGTGGCCG TCTATCGCGC GGCGCGCGAC GAGCAGTGCC TGATGGCGCA GGCGCCGACC GGCATCGGCA AGACGCTCGG CACCGTGTTT CCGCTGCTGA AGGCATGCGG CGAGGGTGAG CTCGACCATG TGTTCTTCCT CACCGCGAAA ACGCCTGGCC GCGCGCTCGC GCTCGAAGCG GCGACGACCC TCGGCGCCGG CACGCCCGCG CTGCCGCTGC GCGTGCTGGA ACTCGTCGCG CGCGACAAGG CGTGCGAGCA TCCGGACCTC GCGTGCCACG GCGAATCGTG CCCGCTCGCG AAAGGCTTCT ACGACCGGCT GCCGGCCGCG CGCCATGCGG CGATCGAGGC GGGGCTGCTC GATCGCGATA CCGTACGCAC CGCGGCGCTC GCGCACGACG TCTGTCCGTA TTACCTGGCG CAGGAGCTTG CACGCTGGTC GGACATGATG ATCGGCGACT ACAACTACTA CTACGACGGC AGCGCGATGC TGCACACGCT CGCGCAGCAG AATCAGTGGC GGGTCGGCGT GCTCGTCGAC GAAGCGCACA ACCTGCTCGA CCGCGCGCGC AAGATGTACA GCGCGTCGCT CGATCCGTTC GCGTTCGCGG CTGCGCGCGA AGCCGCGCCT GCCGCGCTGC GCAAGGCGTT CGACCGGCTC GCCCGCGCGT GGGGCACGCT CAATCGCGCG CAGGCCGAGC GCTATGCGGC CTATCCCGAG GTGCCGGGCC CGATCGTGTC GGCCGTGCAA AACCTCGTTG CGGCGATCGG CGAACACCTG ACCGACGCAC CGCGCGCGAA CGGCGACGCG CTGCTGCGCT TTCATTTCGA GGCGATCCAG TTCGGCATGC TGGCCGAAGC ATTCGACAGC GCATCGATCT TCGACGCGAC GCTGCATGGC GAACCGATGC CGCGCCAGCC AGTACTCGAC GGCGTCGCGA CGGCCGGCCG CCGGCGTCGC GTCCAGTCGG CGCTGTGCGT GCGCAACGTG ATCCCGGCCG GTTTCCTCGC GCCGCGCTAC GAAGCCGCGC GGGCGACCGT GCTGTTCTCG GGCACGCTGA GCCCGTTCCA TTTCTACCGC GACACGCTGG GGCTGCCCGG CGACACGGGC TGGCTCGACG TCGACGGGCC GTTTCGCGCC GAGCAACTGA CGGTGCGCGT GGCAAGCCAC GTGTCGACAC GCTGGCGCGA CCGCGATCGC TCGCTCGAGC CGATCGCCGA CCTGATCGCC GCGCAATACG CGGCACGGCC CGGGAACTAT CTCGGCTTCC TGAGCAGCTT CGACTACCTG GGGCGCGTGG TCGCGCTGAT GCAGACGCGC CATCCGGACG TTCCCGTGTG GGCGCAGGCG CCCGGCATGG CCGAAAGCGA ACGCGACGCG TTTCTCGCAC GCTTCGACGC CAGTGGACGC GGCGTGGGCT TCGCGGTGCT GGGCGGGGCC TTCTCGGAAG GCGTCGATCT GGTGGGCGAG CGGCTGATCG GCGCGTTCAT CGCGACGCTC GGGCTGCCGC AGGTCAACGA CATCAACGAG CAGATGCGGC GCGCGATGGA AGCTCGCTTC GGCAACGGTT ACGACTACAT GTACCTGTAT CCGGGGCTGC AGAAGGTCGT GCAGGCGGCC GGGCGCGTGA TCCGCACCGA GCACGACGAA GGCGTCGTGC ATCTGATCGA CGACCGTTAC CGACGGCGCG AAGTGCGCAA TCTGCTGCCG CGGTGGTGGC GGATCGGGTG A
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Protein sequence | MSYVVAVRAM CEFTARRGDL DLRFTPAPTA LEGIAGHGAV TSKRGARYET EIALTGTWGT LTVRGRADGY DPVANRLEEI KTYRGSLDAM PANHRALHWA QAKVYAHLMC DARDLKEINV ALVYFDIVSE RETVLTETLD AGTLATFFAE QCACFVGWAE RETAHRAARD AALRALAFPH GQFRSGQREL AVAVYRAARD EQCLMAQAPT GIGKTLGTVF PLLKACGEGE LDHVFFLTAK TPGRALALEA ATTLGAGTPA LPLRVLELVA RDKACEHPDL ACHGESCPLA KGFYDRLPAA RHAAIEAGLL DRDTVRTAAL AHDVCPYYLA QELARWSDMM IGDYNYYYDG SAMLHTLAQQ NQWRVGVLVD EAHNLLDRAR KMYSASLDPF AFAAAREAAP AALRKAFDRL ARAWGTLNRA QAERYAAYPE VPGPIVSAVQ NLVAAIGEHL TDAPRANGDA LLRFHFEAIQ FGMLAEAFDS ASIFDATLHG EPMPRQPVLD GVATAGRRRR VQSALCVRNV IPAGFLAPRY EAARATVLFS GTLSPFHFYR DTLGLPGDTG WLDVDGPFRA EQLTVRVASH VSTRWRDRDR SLEPIADLIA AQYAARPGNY LGFLSSFDYL GRVVALMQTR HPDVPVWAQA PGMAESERDA FLARFDASGR GVGFAVLGGA FSEGVDLVGE RLIGAFIATL GLPQVNDINE QMRRAMEARF GNGYDYMYLY PGLQKVVQAA GRVIRTEHDE GVVHLIDDRY RRREVRNLLP RWWRIG
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