Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_4349 |
Symbol | |
ID | 4452743 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008543 |
Strand | + |
Start bp | 1293546 |
End bp | 1294931 |
Gene Length | 1386 bp |
Protein Length | 461 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639696405 |
Product | amino acid permease-associated region |
Protein accession | YP_837976 |
Protein GI | 116692443 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1113] Gamma-aminobutyrate permease and related permeases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.400009 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTTTCTG GAAACGAGAG CGACGGCCTG AAGCGCGGGC TGAAGAACCG GCACATCCAG CTGATTGCGC TCGGCGGCGC GCTCGGCACG GGGCTGTTCC TCGGCATCGC GCAGACGATC AAGATGGCCG GCCCGTCCGT GCTGCTCGGC TATGCGGTGG CCGGCATCGT TGCGTTCTTC ATCATGCGCC AGCTCGGCGA GATGGTCGTC GACGAGCCCG TCGCCGGCTC GTTCAGCTAC TTCGCCGACA AATACGTCGG CCACTTCACC GGTTTCCTGT CCGGCTGGAA CTACTGGGTG CTGTACATCC TCGTCAGCAT GGCCGAACTG TCGGCCGTCG GGATCTACGT GCAGTACTGG TGGCCGGGCG TGCCGACCTG GGTGTCGGCG CTCGTGTTCT TCGTCGCGAT CAACCTGCTG AACCTGGCGA GCGTGAAATC GTACGGCGAG ACGGAATTCT GGTTCTCGAT CATCAAGGTC GCCGCGATCG TCGGGATGAT CGGCTTCGGC GGCTGGCTGC TCGCAAGTGG CCATGCAGGG CCTGAAGCGA GCATCGCGAA CCTGTGGCAG CACGGCGGTT TCTTCCCGAA CGGCGTGTCG GGGCTCGTGA TGTCGATGGC CGCGATCATG TTCTCGTTCG GCGGGCTGGA GCTGATCGGC ATCACCGCGG CCGAGGCCGA CGATCCGAAG CGCAGCATTC CGCGTGCGAC CAACCAGGTC ATCTACCGCA TCCTGATTTT CTACATCGGC GCGCTGGCCG TGCTGCTGTC GCTGTATCCG TGGGAGAAGG TCGTCACCGG CGGCAGCCCG TTCGTGCTGA TCTTCCACGC GCTGAGCAGC AACCTGGTCG CGAACGTGCT GAACGTCGTC GTGCTGACGG CCGCGCTGTC GGTCTACAAC AGCGGCGTGT ACAGCAACAG CCGGATGCTG TTCGGCCTCG CGCAACAGGG CAACGCGCCG AAGGTGCTGT GCTCGGTGAA CAAGCGCGGC ATCCCGCTTG CCGCGCTCGG CGCGTCGGCG CTCGCGACCG GCGTGTGCGT GCTGGTCAAC TACTTCATGC CGGGCAAGGC GTTCGAGGTG CTGATGGGCC TCGTCGTGTC GGCGCTGATC ATCAACTGGG CGATGATCAC CCTGATCCAC CTGAAGTTCC GCCAGGCCAA GTGTGCTGCC GGGGAGGAGA CTTCCTTCCG CAGTCTGGGC TATCCTTTCA CGAATTACCT GTGCCTGGCA TTCATGGCCG GCATTCTCGT CGTGATGTAC CTGACGCCGG ATCTCCGTCT GTCGGTGTAC CTGATCCCGG TATGGCTCGC GGTGCTCGCG ATCGGGTATC GCTTCCGTCA GAAGAATGCC GGCTTTGCGG TGCACGACGG CGCGTCCGCA CGCTGA
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Protein sequence | MVSGNESDGL KRGLKNRHIQ LIALGGALGT GLFLGIAQTI KMAGPSVLLG YAVAGIVAFF IMRQLGEMVV DEPVAGSFSY FADKYVGHFT GFLSGWNYWV LYILVSMAEL SAVGIYVQYW WPGVPTWVSA LVFFVAINLL NLASVKSYGE TEFWFSIIKV AAIVGMIGFG GWLLASGHAG PEASIANLWQ HGGFFPNGVS GLVMSMAAIM FSFGGLELIG ITAAEADDPK RSIPRATNQV IYRILIFYIG ALAVLLSLYP WEKVVTGGSP FVLIFHALSS NLVANVLNVV VLTAALSVYN SGVYSNSRML FGLAQQGNAP KVLCSVNKRG IPLAALGASA LATGVCVLVN YFMPGKAFEV LMGLVVSALI INWAMITLIH LKFRQAKCAA GEETSFRSLG YPFTNYLCLA FMAGILVVMY LTPDLRLSVY LIPVWLAVLA IGYRFRQKNA GFAVHDGASA R
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