Gene Bcen2424_4339 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_4339 
Symbol 
ID4452698 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008543 
Strand
Start bp1283847 
End bp1284623 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content64% 
IMG OID639696395 
Productextracellular solute-binding protein 
Protein accessionYP_837966 
Protein GI116692433 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTCCGT TCATCAAGCG GTTCGGCGCG CTGGCCGCCG GTTTCGTCAC CTGTATCGCA 
CTCTCCACGG CTTCGGCGAG CGCCGTTGCC GCCGAGCCCA CGCTGAAGGT CGGCGCGACG
GCCACCGGCG TGCCGTTCAC GTTTCTCGAC GTCAAGAGCA ATTCGATCCA GGGGATGATG
GTCGATGCGA TCACCGCGGC CGGGAAGTCG GCCGGGTTTC GCGTCGACGT GCAGCAGACC
GTGTTCTCCG CGCTGATCCC GTCGCTCACC ACGCAGAAGA TCGACATCAT CTCGGCCGCG
ATGCTGAAGA CGCCGGCGCG CCAGCAGGTC GTCGATTTCT CGGACACCGT CTACTCGTTC
GGCGAAGGCC TGATCGTGAA GGCCGACGAT CCGGGCCGCT ATACGTCGAT GGACGATTTC
AAGGACCAGG TGGTCGGCGC GCAGGTCGGC ACCGCATTCG TCGATGCGCT CAACAAGAAG
GGCATCTTCA AGGAAGTCCG GACCTACGAT TCGATCGCCG ACATCATGCG CGACGTCGCG
CTCGGCCGTA TCAAGGCCGG CTTCGCCGAC CAGCCGATCG TCGCGTACCA GATCGAGCAC
GGCGTCAATC GCCAGGTGCG GCTGGTGCCC GAATACCAGA GCGTCGTGAA GGGGCAGGTG
TGCTTCATCG TGCGCAAGGG CGACAACGCG ACGCTCGAGC AGCTCAACGG CGCGATCCGC
AAGATGAAGA GCGACGGCAC GCTGCAGCAG ATCCTGCAGA AGTGGCACAT GAGCTGA
 
Protein sequence
MVPFIKRFGA LAAGFVTCIA LSTASASAVA AEPTLKVGAT ATGVPFTFLD VKSNSIQGMM 
VDAITAAGKS AGFRVDVQQT VFSALIPSLT TQKIDIISAA MLKTPARQQV VDFSDTVYSF
GEGLIVKADD PGRYTSMDDF KDQVVGAQVG TAFVDALNKK GIFKEVRTYD SIADIMRDVA
LGRIKAGFAD QPIVAYQIEH GVNRQVRLVP EYQSVVKGQV CFIVRKGDNA TLEQLNGAIR
KMKSDGTLQQ ILQKWHMS