| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_4334 |
|---|
| Symbol | |
|---|
| ID | 4452693 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008543 |
|---|
| Strand | - |
|---|
| Start bp | 1280014 |
|---|
| End bp | 1280820 |
|---|
| Gene Length | 807 bp |
|---|
| Protein Length | 268 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 639696390 |
|---|
| Product | short chain dehydrogenase |
|---|
| Protein accession | YP_837961 |
|---|
| Protein GI | 116692428 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAGCTT CCGACCTGCT GAAACCCTAT GACGGCCTGC GCGTCCTCGT GACCGGCGGC
GCGTCGGGCA TCGGCCTCGA AATCGCCGAC GCGTTCGCCG AATGCGGCGC GCGCGTGCAC
GTTTGCGATG CGTCGCAAGC CTCGATCGCG GCGCTCGCCG ACCGGCCGCC GCGTGCCGCG
ACCGGCGCGA TCAGCGCGAC GCTGGCCGAC GTGTCCGACC CGGCCGCCGT CGAGCGCGTG
TTCGCCGACG TGTCGACCCG GCTCGGCGGC CTCGACGTGC TGGTCAACAA CGCGGGCATC
GCCGGCCCGA CCGGCGGCAT CGACGAAATC GACCCCGTGC AGTGGGAGCA GACCGTCGCG
ATCAACCTGA ACGCGCAATT CCAGTTCGCG CGCCGCGCGG TGCCGCTGCT GCGCGAGTCG
AAACCCGGCG GCGCGATCAT CGCGCTGTCG TCGGTCGCCG GCCGGCTCGG CTACGCGTTC
CGCACGCCGT ATGCGGCCAC CAAATGGGCG GTGGTCGGCC TCGTGAAAAG TCTCGCGATC
GAACTCGGGC CGCTCGGCAT CCGCGTGAAC GCGATCCAGC CCGGCATCGT GCGCGGCCCG
CGGATGCGCC GCGTGATCGA GGCGCGCGCG CAGCAGCTCG GCATCGGCTA CGACGAAATG
GAGCAGCGCT ATCTCGAGAA GATCTCGCTG CGGCGCATGA CCGATCCGGC CGAGATCGCC
GCGACCGCGC TGTTCCTGTG CTCGCCGGGC GGGCACGGAA TCACCGGGCA GGCGATCTCC
GTCTGCGGCA ACGTCGAAGT GCTCTGA
|
|---|
| Protein sequence | MTASDLLKPY DGLRVLVTGG ASGIGLEIAD AFAECGARVH VCDASQASIA ALADRPPRAA
TGAISATLAD VSDPAAVERV FADVSTRLGG LDVLVNNAGI AGPTGGIDEI DPVQWEQTVA
INLNAQFQFA RRAVPLLRES KPGGAIIALS SVAGRLGYAF RTPYAATKWA VVGLVKSLAI
ELGPLGIRVN AIQPGIVRGP RMRRVIEARA QQLGIGYDEM EQRYLEKISL RRMTDPAEIA
ATALFLCSPG GHGITGQAIS VCGNVEVL
|
|---|
| |