Gene Bcen2424_4331 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_4331 
Symbol 
ID4452690 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008543 
Strand
Start bp1276083 
End bp1277342 
Gene Length1260 bp 
Protein Length419 aa 
Translation table11 
GC content62% 
IMG OID639696387 
ProductHipA domain-containing protein 
Protein accessionYP_837958 
Protein GI116692425 
COG category[R] General function prediction only 
COG ID[COG3550] Uncharacterized protein related to capsule biosynthesis enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.842416 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.577395 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGAGC GGATCGATGT CTACTACGAC GGCTGGGGGG AGCACTGGCT GTGGGGATCG 
ATGGTTTCTA CGACGGCGAT CACGGGGCGC CCGTTGATCG TATTCGAATA TAGCGATGAC
GCGCGCAAAA GGGGGCTGGA ACTGTCGTCT TATGCGCTCC CATTGCATGG GGCGAGGCTG
CGCAAGGACT TTCCGTCCCA CCAGCTGGGA TTGCCCGGCC CAGTCTATGA CGCGCTGCCC
GACGGATGGG GCATGTTGCT CATGGACCGC TTGTTCAAAC GCCGCGGTCT CAACGCGGCA
CGCATCGGGC CGCTGGAGCG GTTGGCTTAC ATTGGCAACC ACGCAATGGG CGCCATGTCG
TTCGAGCCGG TCGCGGTCGA GATCCAGGCA CCGCAGCCGG ATATTCCTCT CGACCGGCTC
GCGGCCGAGG TACAGGAAGT CCTCAACGGT GAGGGCGGCG AATTCCTTCA TCAACTGCTG
CAGGTGGGCG GCTCTCCGCA AGGTGCCAGG CCGAAGGCCC TGGTCTATCG TGATCCGCAG
TCCGGCGTTT TTACCACGGC CGCGGTGGCG GGTTTTGACG CGTGGTTGGT CAAGTTCCCG
GCTCGGCAAG AGCATCCCGA GGTGTGCGCG ATCGAAATGG TCTACGCCGA GTGCTTGCGC
ATGTGCGGCA TCGAGACCCC GGACACGCTG CATTTCAATT TGCCTGACGG GATGGCGGCA
TTTGCGTCCC GGCGTTTCGA TCGACGGGAC GGTCTGCGCG TGCCCATGCA AAGCGTTGCC
GCGTTTACCG GTGCCGATTA CAAAACGCCG GGGGCGCTGG ACTACGTGAA CTTCTTGCGT
GCGACTCACA TGTGCACCAA CGACGTACGC GAGAAGGCGC GGGCGTTTGA ACGGGCTGTC
TTCAATGTCG CGTTCAACAA TCGCGACGAT CATCCGAAAA ACTTCGCTTA CGTCATGTCG
CGATCCGGCC AGTGGAAACT CGCGCCGGCC TACGACGTGA CATTCTGCGA GGGGCCGGGC
GGTTACCACC AAATGGACGT CATGGGCGAG GCGCTGCGGA TCGACCGGGC GGCATTGCTC
GGACTGGCAA AGGAAGCAGA GCTTTCCGCA GCCGTTGCCA GCGACATGAT CGACGGAATG
TGCGGAGTAG CCAGCCAGTT CTCGGCCATT GCGAAGCGCC GCTACGAGGG GATCATCACA
GAAGACACGC TGACGGACAT TCAGCGTCGA ATCGACGAGA ACGTTGCGCT GCTGCGCTAG
 
Protein sequence
MIERIDVYYD GWGEHWLWGS MVSTTAITGR PLIVFEYSDD ARKRGLELSS YALPLHGARL 
RKDFPSHQLG LPGPVYDALP DGWGMLLMDR LFKRRGLNAA RIGPLERLAY IGNHAMGAMS
FEPVAVEIQA PQPDIPLDRL AAEVQEVLNG EGGEFLHQLL QVGGSPQGAR PKALVYRDPQ
SGVFTTAAVA GFDAWLVKFP ARQEHPEVCA IEMVYAECLR MCGIETPDTL HFNLPDGMAA
FASRRFDRRD GLRVPMQSVA AFTGADYKTP GALDYVNFLR ATHMCTNDVR EKARAFERAV
FNVAFNNRDD HPKNFAYVMS RSGQWKLAPA YDVTFCEGPG GYHQMDVMGE ALRIDRAALL
GLAKEAELSA AVASDMIDGM CGVASQFSAI AKRRYEGIIT EDTLTDIQRR IDENVALLR