| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_4307 |
|---|
| Symbol | |
|---|
| ID | 4452330 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008543 |
|---|
| Strand | + |
|---|
| Start bp | 1250699 |
|---|
| End bp | 1251847 |
|---|
| Gene Length | 1149 bp |
|---|
| Protein Length | 382 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639696363 |
|---|
| Product | epocide hydrolase domain-containing protein |
|---|
| Protein accession | YP_837934 |
|---|
| Protein GI | 116692401 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.765284 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCACGCCG AACCGTTCGA CATTGCGATA TCCGATCAAG CGCTCGACGA TTTGCGGCGG
CGCGTGCGCG ACACCCGCCC GCCCAACCTG ACACCCGCCG AGCCGTGGCA GCAGGGCGTC
GACGGCGCGT GGCTGCGCGA ACTGGCCGCG TACTGGGCCG GCGGCTTCGA TTGGCGCGCG
GCGGAACGTG CGCTGAACCG GCTGCCGCAG TTCATCGCGG ACGTCGGCGG CCGGCGCGTG
CATTTCGTGC ATCGGCGCGG CACCGGCCCG AAACCCTATC CGCTCGTCGT CACGCACGGC
TGGCCGGGTT CCGCATTCGA ATTCCATGCA CTGATCGATC GCCTGTGCGA TCCGGCCGCG
TTCGGCGGCG ATCCGGACGA CGCCTTCGAC ATCGTCGCGC CGTCGCTGCC CGGCTTCCTG
TTTTCTCCCG CGCCGGCGGC GCCCGGCACG TCGGCGCTTC AGGTCGCCGA CTGCTGGGCG
GCATTGATGG CCGGCCTGGG CTACCCGCGG TTCGGCGCAC AGGGCGGCGA TCTGGGCGCG
GGCGTGTCGG TCGCGCTCGG CGCTCGGCAT GAGGGCGTGG TCGACGGCAT CCATCTGAAC
TACCTGCCCG GTAGCTACGA CCCGCCGATC GACGCGGCGC GGCCGCTGAC CGACGACGAG
CAGGCGTTCC TGAAGCAGCG CGGCGAGTGG GCGGCGCTCG AAGGCGGGTA CGCGTACGTC
CACATGACGA AGCCGCAGAC GCTGGCCATC GCGCTCAACG ATTCGCCGCT CGGGCTGGCC
GCGTGGATCG GCGAGAAATT CCGTGCGTGG AGCGATTGCG ACGGCGACGT CGCGCGCCGT
TTTTCGCACG ACACGCTGCT GACGGGCATC TCGCTCTACT GGTTTACCGG CTGCATCGGC
TCGTCGATGC AGATGTACTG GGAGAACCGG CTGCAGCCGA TGCGGTTTGC GCCCGGGCAA
CGCCTGGCGG TGCCCGTCGG CTTCGCGCGC TTTCCGAAGG AAATCAGCCG CCCGCCGTGC
AGTTGGCTCG AACGCGTATT CGACGTGGTG CAGTGGACTG ACATGCCGAG CGGCGGCCAT
TTCGCGGCGA TGGAGGAGCC GGACTTGCTG GCCGACGATA TTCGGCGGTT TTTCAGGCGT
TTCCGATAA
|
|---|
| Protein sequence | MHAEPFDIAI SDQALDDLRR RVRDTRPPNL TPAEPWQQGV DGAWLRELAA YWAGGFDWRA
AERALNRLPQ FIADVGGRRV HFVHRRGTGP KPYPLVVTHG WPGSAFEFHA LIDRLCDPAA
FGGDPDDAFD IVAPSLPGFL FSPAPAAPGT SALQVADCWA ALMAGLGYPR FGAQGGDLGA
GVSVALGARH EGVVDGIHLN YLPGSYDPPI DAARPLTDDE QAFLKQRGEW AALEGGYAYV
HMTKPQTLAI ALNDSPLGLA AWIGEKFRAW SDCDGDVARR FSHDTLLTGI SLYWFTGCIG
SSMQMYWENR LQPMRFAPGQ RLAVPVGFAR FPKEISRPPC SWLERVFDVV QWTDMPSGGH
FAAMEEPDLL ADDIRRFFRR FR
|
|---|
| |