| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_4299 |
|---|
| Symbol | |
|---|
| ID | 4452322 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008543 |
|---|
| Strand | - |
|---|
| Start bp | 1242144 |
|---|
| End bp | 1242800 |
|---|
| Gene Length | 657 bp |
|---|
| Protein Length | 218 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639696356 |
|---|
| Product | lysine exporter protein LysE/YggA |
|---|
| Protein accession | YP_837927 |
|---|
| Protein GI | 116692394 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1280] Putative threonine efflux protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGTTCA AGCTTTATCT GTCGTTCCTC GCTGCTTCCG TCGTCCTCAT CTACGCGCCC
GGCCCCGTCA ACCTGCTCAC GATGAACCAG GCGTTGCGCA CCGGTTGGCG CCGCGCGCTG
CCGTGCGTCT GGGGCGGCAC GCTCGCCGTG CTGCTGCAAC TCGCGCTGAC CGCGCTGTGC
CTCAATTCGC TGGTCCACCT CGATGAACAC GCCCTGACCG TGCTGCGCTG GGCCGGCGCC
GCGTATCTCG TCTGGCTCGG CGGCAAGCAA TGGCTGAGCC GCACGCCGGC CGGCGCGGCC
GCGGCGCCCG CCGAGACCGA CGCAGGAACG GCCATCGCCG CGCCGGACGC CGACTCCGGA
CGCGCGCTGT TCTGGCGCGG CGTCGCGACT TCCGGGCTGA ATCCGAAGAC GCTGCTGTTC
TTTCCGTCGT TCTTTCCGCA GTTCATCAGC CCGAACGCCG ACTGGAGCCT GAACCTTCAA
TACCTGCTGC TCGCCGCGAC GTTCGCGCTG CTGTTCGCGG GCGGCGTCGC ATCGATGGCG
CTGTTCTCGC ACCGGCTGAG CCGCGCGTTG CAGCGGCCGG CGCGGATGCG TGCGATGAAC
CGCGTGACGG GCGGGCTGCT CGTCGGGATG GGCGCGATCA TGGTCGGCTG GAACTGA
|
|---|
| Protein sequence | MSFKLYLSFL AASVVLIYAP GPVNLLTMNQ ALRTGWRRAL PCVWGGTLAV LLQLALTALC
LNSLVHLDEH ALTVLRWAGA AYLVWLGGKQ WLSRTPAGAA AAPAETDAGT AIAAPDADSG
RALFWRGVAT SGLNPKTLLF FPSFFPQFIS PNADWSLNLQ YLLLAATFAL LFAGGVASMA
LFSHRLSRAL QRPARMRAMN RVTGGLLVGM GAIMVGWN
|
|---|
| |