Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_4291 |
Symbol | |
ID | 4452314 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008543 |
Strand | - |
Start bp | 1229491 |
End bp | 1231002 |
Gene Length | 1512 bp |
Protein Length | 503 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 639696348 |
Product | RND efflux system outer membrane lipoprotein |
Protein accession | YP_837919 |
Protein GI | 116692386 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCCCCC GCGTGCACCC GGCCGCGATC GGCGCCGTGG CGATCGTCGC GGCCGCGGTG CTCGCCGGCT GCACGGTCGG CCCGGATTAC CGGCGCCCGC CCGTCGATAC GCCGGCCGCG TGGCGGCTCG ACCCGGCCGA CGCATACTGG CAGCCGGCCG CGCCGGCCCG CGCGCCGCTC GATCCCGCCT GGTGGACCGC GTTCGGCGAC GCCCAGCTCG ACGCACTGGA AGCCGACGCG CTGCGCAACA ACCAGAACCT GAAGGCGATG GCCGCGCGCT ACGACCAGGC GAAGGCGACG CTCGCGTCGG TGGCGTCCGC GCAGTATCCG GCCGTCGGGC TGAACGCAAG CGGCCAGCGC TTCAAGATCT CCGCCGACCG GCCGCAGACC AACTACGCGA CGCAGAGCAT GTCGACCGTG CAGAACGACA TCCAGGTGGG CGCGGCGGTC AGCTACGAAC TCGACCTGTT CGGCCGCGTG CGGCGCAACG TCGAAGCCGC GCAGGCCAGC ACCGAGCAGT CGCGTGACGA TTTCGCAAAC GCGCGCCTCG TGCTGAGCGC CGACCTCGCG TCGAGCTATT TCACGCTGCG CGAGCTCGAC ACCGAGATCG ACGTCGTCAA GCGCTCGATC GACCTGCAAC AGAAGGCGCT CGATTACGTC AGCGCGCGCC ACGACCTCGG CGCGGTGTCG GGCCTCGACC TGTTGCAGCA GCGCGCGCAG CTCGACGCGA CCCGCACGCA GGCGCAATTG CTGATCCAGC AACGCGCGCA GGTCGAAACC GCGATCGCGA CGCTGGTCGG TACGCCGGCT CCCGCCTTCT CGCTGCCGCC GCGCGTGGTG CCGATCAACG CGCCCGCGCT GCCGACCGGG ATGCCGAGCG ACCTGCTGCA GCGGCGCCCC GACGTCGCGT CGGCCGAGCG CGCGATGGCC GCCGCGAACG CGCAGATCGG CGTCGCGCGC GCCGCGTATT TCCCGCGTAT CACGCTGTCG CCGGACATCG GCTGGGACGC GACCCGCTTC GCGGGCCTGT TCACCGTGCC GGCACTGCTG TGGTCGGTTG GCGGCTCGCT CAGCCAGCCG CTGTTCGAGG GCGGCAAGCT GAAGGCCGGC GTCGATTTCG CGCAGGCCGG CTACGTCGCC GCGCAGGCCA GCTACCGGCA GACCGTGCTC ACCGCGTTCC AGGAGGTGCA AAATGCGGTG ACCGGCCTGT CGGTGCTCGC GCAGGCCGCG CAGCAGGCTT CCGCGGCCGT CGACGACGCG CGCAAGCTCG TATCGCTTGC GCAGGACCGC TACGCGGGCG GCCTGACGCC GTTCATCGAC GTGCTGACGG CCCAGCAGCA GTTGCTGACG AGCGAGCGCC AGGCCGTGCA GATCCAGGGC CAGCGCGCGG CGCTCGTGGT GTTTCTCGCG AAGGCGCTCG GCGGCGGCTG GGACGGCGAT GCGGCGAGCG GCCTGGCGCC GTCCGACGTC GCGTCGGCGG CCCCGCAGCG CGGCGCGGGT GTCGGCCCTT GA
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Protein sequence | MRPRVHPAAI GAVAIVAAAV LAGCTVGPDY RRPPVDTPAA WRLDPADAYW QPAAPARAPL DPAWWTAFGD AQLDALEADA LRNNQNLKAM AARYDQAKAT LASVASAQYP AVGLNASGQR FKISADRPQT NYATQSMSTV QNDIQVGAAV SYELDLFGRV RRNVEAAQAS TEQSRDDFAN ARLVLSADLA SSYFTLRELD TEIDVVKRSI DLQQKALDYV SARHDLGAVS GLDLLQQRAQ LDATRTQAQL LIQQRAQVET AIATLVGTPA PAFSLPPRVV PINAPALPTG MPSDLLQRRP DVASAERAMA AANAQIGVAR AAYFPRITLS PDIGWDATRF AGLFTVPALL WSVGGSLSQP LFEGGKLKAG VDFAQAGYVA AQASYRQTVL TAFQEVQNAV TGLSVLAQAA QQASAAVDDA RKLVSLAQDR YAGGLTPFID VLTAQQQLLT SERQAVQIQG QRAALVVFLA KALGGGWDGD AASGLAPSDV ASAAPQRGAG VGP
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