| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_4262 |
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| Symbol | |
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| ID | 4452215 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia HI2424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008543 |
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| Strand | + |
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| Start bp | 1198036 |
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| End bp | 1199103 |
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| Gene Length | 1068 bp |
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| Protein Length | 355 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639696319 |
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| Product | squalene/phytoene synthase |
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| Protein accession | YP_837890 |
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| Protein GI | 116692357 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1562] Phytoene/squalene synthetase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0172457 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.1857 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGACCC ATACCGATCC CGCCTATCTG CTCGGCGAAC TGCTGAAGAA CGTTTCCCGC
TCCTTCTACC TGACGCTGCG CGTGCTGCCC GACGGCATGC GCGACCCGGT CGGCCTCGCG
TATCTGCTCG CGCGCGCGGC CGACACGATC GCCGACACGG CGCTCGTCGC GCCTGATCGC
CGCGCGGCGC TGCTGACCGA CCTGCGCGAC GACATCGAAC GGCTCGGCGA TGGCGCGGCG
CTGTCGCGTT CGCTCGAGGA CGTGACGCGG ATGCAGACCG ATTCGCACGA ACACCTGCTG
CTCGGTTCGA TGGAGCCGAT GCTCGCGCTG CTGCGCGCGC AGCCGGAGGC CGATCGCGCG
TCGATCCGCA AGGTCGTCGC GACGCTCACC GCGGGGATGG AGTTCGACCT GCGCACGTTT
CCGCACGAGC AGTCGGGGCA GGTCGCATCG CTGCCGACGC GCGACGTGCT CGACCGCTAC
ACGTACCTGG TCGCCGGCTG CGTCGGCGAG TTCTGGACCG ACATGACGGG CGCGCACACG
CGTGCCGCGC GCGGCTGGGA TCTGTCGGAC ATGCGCGAGA AGGGAATCCG TTTCGGCAAG
GCGCTGCAGA TGACCAACAT CCTGCGCGAC TGCGCGAAGG ATCTGCGCAT CGGCCGCTGC
TACCTGCCCG ACGACGTGCT GGGCGCACAC GGGCTCGTGG TGGCCGACCT GATGCAGCCA
GAAGCATCGG AACGTGCGCG CGGCGTGCTG GTCGACCTGC TGCGCGTCGC GCTCGACCAG
TATCGCGACG CCTACCTGTA TACGCTCGCG ATTCCGCGTC GTTTCGTGCG GCTGCGGCTC
GCCTGCCTGT GGCCGATCAT GATCGGCCTC GAAACGCTCG AACTGCTGGC CGGCCACGCG
GCGTGGCTCG ACCCGGCGAA GCCGGCCAAG GTGCCGAGAA AGCGCGTCTA CCGGATCATG
GCGGCGTCGC TCGCGCTGGT CGGCTCGAAC ACGGCGGTCC GTTCGCGTCT GACCGCGCTC
GCCGATGCGG TGACCGCGCG GCTCGCGCGC CCCGCGACGC AGCTCTGA
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| Protein sequence | MTTHTDPAYL LGELLKNVSR SFYLTLRVLP DGMRDPVGLA YLLARAADTI ADTALVAPDR
RAALLTDLRD DIERLGDGAA LSRSLEDVTR MQTDSHEHLL LGSMEPMLAL LRAQPEADRA
SIRKVVATLT AGMEFDLRTF PHEQSGQVAS LPTRDVLDRY TYLVAGCVGE FWTDMTGAHT
RAARGWDLSD MREKGIRFGK ALQMTNILRD CAKDLRIGRC YLPDDVLGAH GLVVADLMQP
EASERARGVL VDLLRVALDQ YRDAYLYTLA IPRRFVRLRL ACLWPIMIGL ETLELLAGHA
AWLDPAKPAK VPRKRVYRIM AASLALVGSN TAVRSRLTAL ADAVTARLAR PATQL
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