| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_4258 |
|---|
| Symbol | |
|---|
| ID | 4452211 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008543 |
|---|
| Strand | - |
|---|
| Start bp | 1193149 |
|---|
| End bp | 1194123 |
|---|
| Gene Length | 975 bp |
|---|
| Protein Length | 324 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 639696315 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_837886 |
|---|
| Protein GI | 116692353 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.000322275 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.291144 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGCCGA ATATAATGGA TCGTCATGAT GCACCTGAAA GACCATGCAG AACAAACATG
AAAATTAGCG ATATCGACGC TTTTGCAGCG GTCGTCCGCT GCCAGACCCT GAGCCAGGCC
GCGGCCGAGC TCGGGATGAC GCAGCCCGCG ATCACGCGGC GCGTCCAGAA TCTCGAGGAA
GCGCTCGGCG TGACGCTGCT CGACCGCAAC ACGAAGCCGC CGCGCCCGAC CGACATCGGC
CGGCAGGTGT TCGAACAGTG TCGCGCGATC CTGCGCGAGG TCGACGCGCT GCGCGAACTG
ACGGCCGGCC AGCAGCCGCC GGCCGGCGAA TTCCGGATCG GGGTCACGCA GGGGCTCGGC
GAGCTGATGC TGCCGGCGCT CATCGGCGAT CTCGCCGCGC AATGGCCCGC GCTCGCGACG
CAGGTCACGA CTGCATGGGG CGGCCTGCTC GTCGAACGCA TCGCCCGCCG CGAACTCGAT
GCGGCGCTCG TCTTCCTTGC CCGCGAAATG GTGCTGCCGG CGCAGGTCGA AGGCGTTCGG
CTGCTGGACA CGCGGCTCGT CGCGGTCGGC CGCAAGGGCG ACTGGCCGCG CCGCAGCTAC
CGGCTCGCCG ATTGCCATGC GCGCGGCTGG GTGCTCAATC CGGACGGCTG CGGTTTTCGT
GCGGGCCTGC GGCGCGCGCT CGACGCCCAG GGTCTGCCGA TGCCGGTCAC GCTCGACGCG
TACGGCCGCG ACCTGCAACT GCAGAGCGTC GCGAACGGGT TCGGCCTCGG GCTGATGCCG
CTGCCGCTCG TCGAAGGCAG CCCGCTGCGC GACGCGCTCG ACATCGTGCC ACTCGCCGAT
TTCAAGCCGC AGATCGATCT GTGGCTGCTG CGCCGGCACG ATGCGGCCCG TTTCGACGCG
CCGCTCGCGG CCATCGCCGC GCATGCGCGC GCCGCGTTCG CGCTGCCCGA GCGATCGCAC
GACAAGGCCG CTTGA
|
|---|
| Protein sequence | MMPNIMDRHD APERPCRTNM KISDIDAFAA VVRCQTLSQA AAELGMTQPA ITRRVQNLEE
ALGVTLLDRN TKPPRPTDIG RQVFEQCRAI LREVDALREL TAGQQPPAGE FRIGVTQGLG
ELMLPALIGD LAAQWPALAT QVTTAWGGLL VERIARRELD AALVFLAREM VLPAQVEGVR
LLDTRLVAVG RKGDWPRRSY RLADCHARGW VLNPDGCGFR AGLRRALDAQ GLPMPVTLDA
YGRDLQLQSV ANGFGLGLMP LPLVEGSPLR DALDIVPLAD FKPQIDLWLL RRHDAARFDA
PLAAIAAHAR AAFALPERSH DKAA
|
|---|
| |