Gene Bcen2424_4255 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_4255 
Symbol 
ID4452124 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008543 
Strand
Start bp1189506 
End bp1190345 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content70% 
IMG OID639696312 
Producthypothetical protein 
Protein accessionYP_837883 
Protein GI116692350 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0235] Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.00200389 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.282334 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGCCG TCCTTTCGTC GCCCGACCGT ACCGCATCGG GCCTCGTGCT CGCCGACACC 
CCGCGCCAGC ACTTCTGGTT CGACCCGCCC GCGCCGCGCA TCGACGTGGC CGCCGAGCGC
CGCCACCGGC AGGAGCGGCT CGCGGCCGCG TTCCGCCTGT TCGCGCGCTT CGGCTTCGCG
TCGGGCCTCG CCGGCCACAT CACCGCGCGC GATCCGGAGC TGCCCGATCA TTTCTGGGTG
AACCCGCTCG GCGTGCATTT CTCGCAGATC AAGGTCTCCG ACCTGCTGCT CGTCAACGCG
CGCGGCGAAA CCGCGATCGG TCAACGGCCG CTGAACAAGG CCGCGTTCGC GATCCATGCG
GCGATCCACG AAGCCCATCC GCACGTCGTC GCCGCCGCGC ACACGCATTC GACCTACGGC
AAGGCCTGGT CGACGCTCGG CCGCCCGCTC GATCCGCTCA CGCAGGACGC GTGCGTGTTC
TATGAAGACC ACGCGCTGTT CGACGATTTC ACGGGGATGG TCGTCGACAC CAGCGAAGGC
GCGCGGATCG CCGATGCGCT CGCGAAGCCG GACGGCACCA CGCACAAGGG CGTGATCCTG
AAGAACCACG GCATCCTGAC GGCTGGCCCG ACGGTCGAGG CCGCCGCGTG GTGGTACATC
GCGCTCGACA ATGCCGCGCA CACGCAGTTG CTGGCCGAAG CGGCCGGCAC GCCGCAACCG
ATCGATCACG CGACCGCGCG TCATACGCAT GGCCAGATCG GCGGCCCCGA CGGTGCGCTG
CATGCGTTCG ACAGCCTGTT CGCGCGCGTC GTCGCCGACG AACCCGATCT GCTCGACTGA
 
Protein sequence
MSAVLSSPDR TASGLVLADT PRQHFWFDPP APRIDVAAER RHRQERLAAA FRLFARFGFA 
SGLAGHITAR DPELPDHFWV NPLGVHFSQI KVSDLLLVNA RGETAIGQRP LNKAAFAIHA
AIHEAHPHVV AAAHTHSTYG KAWSTLGRPL DPLTQDACVF YEDHALFDDF TGMVVDTSEG
ARIADALAKP DGTTHKGVIL KNHGILTAGP TVEAAAWWYI ALDNAAHTQL LAEAAGTPQP
IDHATARHTH GQIGGPDGAL HAFDSLFARV VADEPDLLD