Gene Bcen2424_4248 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_4248 
Symbol 
ID4452117 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008543 
Strand
Start bp1181867 
End bp1183291 
Gene Length1425 bp 
Protein Length474 aa 
Translation table11 
GC content70% 
IMG OID639696305 
Productperiplasmic sensor signal transduction histidine kinase 
Protein accessionYP_837876 
Protein GI116692343 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.31722 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.105539 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCGCC CGAACCTGCG CGCGCAGGTC GCGCTGTGGC TGCTGCTGCC GCTGCTGGGC 
CTGCTCGCGC TCGACTCGTG GCTCACGTAC CAGCGTGCGA TGAGCGCCGC GCACGTCGCG
TTCGACCGCA CGCTGTCGTC GTCGCTGAAG TCGATCCGTG AAGGCGTGCG GCTCAACGAC
GGCGAGATCG AGGTCGACCT GCCGTATCTC GCGCTCGAAA TGCTCGAATC GAGCGACGGC
GGCAAGATCT ACTACCTGAT CCGCGAGGAC AACGGCCACA CGATCACCGG CTATCCGGAC
CTGCCGCTGC CGCAGGGCCG CGACGCGGGC GACGGCGCGT TGTTCGTCAC GCGGTACTAC
GACGTCGTGT ATCGCGGCGA ACAGTTGCGG ATGGCCGCAC TGCGCATCCC GGTGCACGAC
GTGCCGACCG CGCAGTCGCG CATCGTGTGG GTGATGGTCG GCGAGACGAT CGAGGCGCGC
CAGGCGCTCG CGCGCGAGAT CCTGATCGGG TCGCTGTTGC AGGAAGGGCT GCTCGTCGTG
CTGGCGCTCG GGATCGTGTG GCTCGGCGTC GGCCGCGGGC TGCGGCCGCT GAACCGGCTG
TCGGCCACCG TCGCCGCGCG CAGCGAGGAC GACACGACGC CGCTCGACAC GGGCGCGATG
CCGAGCGAAC TCGCGCCGCT CGTCGATTCG ATCAACCAGT ACATCGGCCG CACGCAGCGG
ATGCAGGTGG CGCGGCGGCG CTTCTTCGCC GATGCGGCCC ATCAGTTGAA GACGCCGCTC
GCGGCCGTCC AGGCGGGCGT CGAACTCGCG CTGCGGCCGG ACGAGCAGCC GCGCGCGAAC
GTGCATCTGC GGCGCGCGAA CGGCGCGGTG CGGCAGGCCG CGAAGATCGT CCAGCAACTG
CTGTCGCTGT CGCGGCTCGA TTCGGACAGC GGTCATGCGG TCGCGCACAA GCCGGTCGCG
CTGCACCGGC TTGCCCGCAG CGTGACGCTC GACTGGTCGC CCGTCGCCCG CGCGCGCGAC
ATCGATCTCG GCTTCGAACA CGAAGCCGAC GTCGACGTGC TCGGCCAATC CGACTTGCTC
GGCGAGATGA TCGGCAACCT GATCGACAAC GCGATCCGTT ATGCGGGCGA CCATGCGGTG
ATCACGGTGC GTATCTCGCG CGACGGCGAA CAGGCGCGGC TCGACGTGAT CGACAACGGG
CCGGGCATTC CGGCCGACGA ACGCGACGCG GTGTTCGAGC GCTTCCATCG CGGCAGCAAG
ACGCAGACGG TCGAAGGCAC CGGGCTTGGG CTGTCGATCG TGCGGGAAAT CGCGCGCGTG
CATCAGGGCA GCGTGACGCT GGCCGATGCG GCCGGCGGCG GCCTCGTCGT GACGATCCGG
CTGCCGGCGG CGGCGGCGAG CGACGCGATG CCGCGCGCCG CGTGA
 
Protein sequence
MTRPNLRAQV ALWLLLPLLG LLALDSWLTY QRAMSAAHVA FDRTLSSSLK SIREGVRLND 
GEIEVDLPYL ALEMLESSDG GKIYYLIRED NGHTITGYPD LPLPQGRDAG DGALFVTRYY
DVVYRGEQLR MAALRIPVHD VPTAQSRIVW VMVGETIEAR QALAREILIG SLLQEGLLVV
LALGIVWLGV GRGLRPLNRL SATVAARSED DTTPLDTGAM PSELAPLVDS INQYIGRTQR
MQVARRRFFA DAAHQLKTPL AAVQAGVELA LRPDEQPRAN VHLRRANGAV RQAAKIVQQL
LSLSRLDSDS GHAVAHKPVA LHRLARSVTL DWSPVARARD IDLGFEHEAD VDVLGQSDLL
GEMIGNLIDN AIRYAGDHAV ITVRISRDGE QARLDVIDNG PGIPADERDA VFERFHRGSK
TQTVEGTGLG LSIVREIARV HQGSVTLADA AGGGLVVTIR LPAAAASDAM PRAA