Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_4248 |
Symbol | |
ID | 4452117 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008543 |
Strand | + |
Start bp | 1181867 |
End bp | 1183291 |
Gene Length | 1425 bp |
Protein Length | 474 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639696305 |
Product | periplasmic sensor signal transduction histidine kinase |
Protein accession | YP_837876 |
Protein GI | 116692343 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.31722 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.105539 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCGCC CGAACCTGCG CGCGCAGGTC GCGCTGTGGC TGCTGCTGCC GCTGCTGGGC CTGCTCGCGC TCGACTCGTG GCTCACGTAC CAGCGTGCGA TGAGCGCCGC GCACGTCGCG TTCGACCGCA CGCTGTCGTC GTCGCTGAAG TCGATCCGTG AAGGCGTGCG GCTCAACGAC GGCGAGATCG AGGTCGACCT GCCGTATCTC GCGCTCGAAA TGCTCGAATC GAGCGACGGC GGCAAGATCT ACTACCTGAT CCGCGAGGAC AACGGCCACA CGATCACCGG CTATCCGGAC CTGCCGCTGC CGCAGGGCCG CGACGCGGGC GACGGCGCGT TGTTCGTCAC GCGGTACTAC GACGTCGTGT ATCGCGGCGA ACAGTTGCGG ATGGCCGCAC TGCGCATCCC GGTGCACGAC GTGCCGACCG CGCAGTCGCG CATCGTGTGG GTGATGGTCG GCGAGACGAT CGAGGCGCGC CAGGCGCTCG CGCGCGAGAT CCTGATCGGG TCGCTGTTGC AGGAAGGGCT GCTCGTCGTG CTGGCGCTCG GGATCGTGTG GCTCGGCGTC GGCCGCGGGC TGCGGCCGCT GAACCGGCTG TCGGCCACCG TCGCCGCGCG CAGCGAGGAC GACACGACGC CGCTCGACAC GGGCGCGATG CCGAGCGAAC TCGCGCCGCT CGTCGATTCG ATCAACCAGT ACATCGGCCG CACGCAGCGG ATGCAGGTGG CGCGGCGGCG CTTCTTCGCC GATGCGGCCC ATCAGTTGAA GACGCCGCTC GCGGCCGTCC AGGCGGGCGT CGAACTCGCG CTGCGGCCGG ACGAGCAGCC GCGCGCGAAC GTGCATCTGC GGCGCGCGAA CGGCGCGGTG CGGCAGGCCG CGAAGATCGT CCAGCAACTG CTGTCGCTGT CGCGGCTCGA TTCGGACAGC GGTCATGCGG TCGCGCACAA GCCGGTCGCG CTGCACCGGC TTGCCCGCAG CGTGACGCTC GACTGGTCGC CCGTCGCCCG CGCGCGCGAC ATCGATCTCG GCTTCGAACA CGAAGCCGAC GTCGACGTGC TCGGCCAATC CGACTTGCTC GGCGAGATGA TCGGCAACCT GATCGACAAC GCGATCCGTT ATGCGGGCGA CCATGCGGTG ATCACGGTGC GTATCTCGCG CGACGGCGAA CAGGCGCGGC TCGACGTGAT CGACAACGGG CCGGGCATTC CGGCCGACGA ACGCGACGCG GTGTTCGAGC GCTTCCATCG CGGCAGCAAG ACGCAGACGG TCGAAGGCAC CGGGCTTGGG CTGTCGATCG TGCGGGAAAT CGCGCGCGTG CATCAGGGCA GCGTGACGCT GGCCGATGCG GCCGGCGGCG GCCTCGTCGT GACGATCCGG CTGCCGGCGG CGGCGGCGAG CGACGCGATG CCGCGCGCCG CGTGA
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Protein sequence | MTRPNLRAQV ALWLLLPLLG LLALDSWLTY QRAMSAAHVA FDRTLSSSLK SIREGVRLND GEIEVDLPYL ALEMLESSDG GKIYYLIRED NGHTITGYPD LPLPQGRDAG DGALFVTRYY DVVYRGEQLR MAALRIPVHD VPTAQSRIVW VMVGETIEAR QALAREILIG SLLQEGLLVV LALGIVWLGV GRGLRPLNRL SATVAARSED DTTPLDTGAM PSELAPLVDS INQYIGRTQR MQVARRRFFA DAAHQLKTPL AAVQAGVELA LRPDEQPRAN VHLRRANGAV RQAAKIVQQL LSLSRLDSDS GHAVAHKPVA LHRLARSVTL DWSPVARARD IDLGFEHEAD VDVLGQSDLL GEMIGNLIDN AIRYAGDHAV ITVRISRDGE QARLDVIDNG PGIPADERDA VFERFHRGSK TQTVEGTGLG LSIVREIARV HQGSVTLADA AGGGLVVTIR LPAAAASDAM PRAA
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