| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_4245 |
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| Symbol | |
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| ID | 4452114 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia HI2424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008543 |
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| Strand | - |
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| Start bp | 1178252 |
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| End bp | 1179733 |
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| Gene Length | 1482 bp |
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| Protein Length | 493 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 639696302 |
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| Product | GntR family transcriptional regulator |
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| Protein accession | YP_837873 |
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| Protein GI | 116692340 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0459012 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGCGAG GCAAAGCCGC GATTCCGCTG GACCTGCCGC GCCCTGCCGG GCTGTCGGGC
GGCAGCCCGC ACTCGAAGCA GGAATGCATC GCCGACACGA TTCGCGACGC GATCCTGAAA
CGCCTGCTGC CCGGCGACAG TCCGCTGCCA TCCAGCCGGA CGCTGGCCGC GCGCTGGGAC
ATCGCGCGCG GCACCGTCGA AGCGGCGTAC GACATCCTGT GCGCCGAGGG CTACATCGCC
CGCACGCAAG GCTCCGGCAC ACGCGTGTGC GCGGTGGTGC CGGACAGCTA TCTGCGCGCG
GCCGCGCGGT CGCAAGACGG CAGTCCGCTC CCCGCCACCC TCGCGTCCCC CGCATCCACC
GCCCCGGCCG AGCCCGAACA CGGCGTGCGT CCGGGCGTCC CGTTCGTCGC GCGGCTCGCC
GACCCCGACC TGCTGCCGAT GCAGCAATGG AAGAAGGCGC TCGGCGCCAG CCTGCTCGCC
GCGACGGCGG ACGACCTCGG TGCGACACCG GCACTGGGCG TCGAAAGCCT GCGCGCCGAG
ATCGCCGCGT ACCTGCGGGA ATACCGCGGC ATCCCGTGCG AAGCCGGCGA CATCGTCATC
ACAACCGGCA TCCGCCACGC GATCGACCTC GTCGCACGCA CGCTGCTCGC ACCCGGCTCG
ACGGTGCTGA TGGAAGACCC CGGCTATGCG TCGGCGTGGC AGATCTTCAC GATCGCGGGC
GCGACCGTGA TCGACGTGCC GGTCGATCGG GAAGGCATCG ACACCGCATC GCTGAATCGC
CATCCCGATG CGCGCGCCGC ATACGTGACG CCGGCCCATC AGGCGCCGCT CGGCGTCACG
ATGTCGGTCT CGCGCCGGCT CGAACTGCTC GACTGGGCGC AGCGCAACCG CACGTGGATC
ATCGAGGACG ACTACGACGG CGAATTCAGC TACCAGACCG CCCCGCTGCC CGCGCTGAAA
TCGCTCGACG CGTGCGACCG CGTGATCTAT TGCGGGTCGT TCAACAAGAC GCTGTTTTCC
GGGCTGCGCA TCGGCTTCAT GGTGGTGCCG GCGGCGCTGC GGCCGGCTCT GTCCGCCGTG
TGGCACGCGA CCGCGCGCTC GGTCGGCGTC GCGCCGCAAC TGGCGCTGGC CCGCTTCATC
GGTCAAGGCG ATTTCGCGAA GCACCTGCGC GCCGCCCGCC ACGCGTACCG CCAGCGGCGC
GACATCGTGC TCGAGCAGCT GGAGAAACAT GCCGGCGGCC GGTACACGGT GACGGGCGAG
CACGCGGGCT TTCATTTCGT GCTGTGGCTG CCACCCGGCA TCGACGATGC CACGTATGTC
GCGCAAGCCC GCGCGGCCGG CGTCGAGCTG CAACCGGTCC GCGGCTTCTG TCGAAGCGCC
CGCCGCGAAG CGGGCGTCGT CGTGGGCTAT GCCGCGCTGA CGGCCGCCCA CGCGCGGCAT
GGCGGCCGCC TCCTCGGCCA ACTGCTGGCC ACTTCCGCGT AG
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| Protein sequence | MSRGKAAIPL DLPRPAGLSG GSPHSKQECI ADTIRDAILK RLLPGDSPLP SSRTLAARWD
IARGTVEAAY DILCAEGYIA RTQGSGTRVC AVVPDSYLRA AARSQDGSPL PATLASPAST
APAEPEHGVR PGVPFVARLA DPDLLPMQQW KKALGASLLA ATADDLGATP ALGVESLRAE
IAAYLREYRG IPCEAGDIVI TTGIRHAIDL VARTLLAPGS TVLMEDPGYA SAWQIFTIAG
ATVIDVPVDR EGIDTASLNR HPDARAAYVT PAHQAPLGVT MSVSRRLELL DWAQRNRTWI
IEDDYDGEFS YQTAPLPALK SLDACDRVIY CGSFNKTLFS GLRIGFMVVP AALRPALSAV
WHATARSVGV APQLALARFI GQGDFAKHLR AARHAYRQRR DIVLEQLEKH AGGRYTVTGE
HAGFHFVLWL PPGIDDATYV AQARAAGVEL QPVRGFCRSA RREAGVVVGY AALTAAHARH
GGRLLGQLLA TSA
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