Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_4241 |
Symbol | |
ID | 4452110 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008543 |
Strand | - |
Start bp | 1172773 |
End bp | 1173864 |
Gene Length | 1092 bp |
Protein Length | 363 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639696298 |
Product | porin |
Protein accession | YP_837869 |
Protein GI | 116692336 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3203] Outer membrane protein (porin) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.0294588 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0402554 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGTCAC GCGCAGAACG TTCGATTCGA ACAGTAGTCC TCACCGGTTC AGCCGCGGCC GCCTGCCTCG CCGCGCCGGC CGCGCACGCG CAGTCGTCGG TCACGATGTA CGGGATCATG GACGCCGGCA TCGAATTCAC GAACCATGCG GCACCACAAG GCGGCAATTC GGTCAAGCTG AAGTCGGGCA ACAAGAACAC GTCGCGCTGG GGCCTGCGCG GCGTCGAGGA TCTCGGCGGC GGGCTGAAGG CCGTGTTCCG GCTCGAAAGC GGAATCGACC TCGCGAACGG CGCCTCGGAC GACGGCCCCG ACTCGATCTT CGCGCGCCGC GCGACGGTCG GTCTGAAAGG GAAATGGGGC GAGCTGTCGC TCGGCCGCAA CTTCACCGTC ACTTACGATT ACATGCTGCC GTTCGACCCG ATGGGTTACG CGCAGAACTA CTCGTGGGCG ACCTCGTCGA TGGCGACCGG CGGCCGCAAG GACGGCCTGT TCACGCGCTC GTCGAACGCG GTGCGCTACG ACGGCGAATT CAGCGGCTTC AAGTTCGGCG CGCTGTACGG GTTCGGCAAC GTGCCGGGCA GCATGAAGAC CAGCTCGAAA TACGATTTCG CGGTGGGCTA CGAGACGGGG CCATTCGCGG CGGTCGTCAC GTTCGACCGG CAGAACGGCG CGGCCGACAG CGTCACGCCG GCCGATACAG TCAACTACAT TCAGGGCATC CACGCGGGCC TGAGCTACGA CTTCGGCAAC CTGAAGACGA TGGCCGGCTA TCGCAACTAT CGGCGCACGT TCCACACCAC GGCCGCGAAC CAGTTGAGCG ACATGTATTG GCTCGGCGGG TCGTACCAGT TCACGCCGAC GTTCTCGCTG ATCGCGGCCG TCTATCACCA GAACATCAAG GGCGGCACGG ATACCGATCC GACGCTGGTG TCGGTGCGTG CGCAGTACGC GCTGTCGAAG CGCACGGTGC TGTATGCGGC CGGGGCGTTC GCGATCGCGA AACACGACCA GAAGGTCGGC GTGTCGCGCG ATTTCAACGG GTATGGCACC ACGCAGGTCG GGGTGACGGC GGGGATTCAG CAGCGGTTTT GA
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Protein sequence | MKSRAERSIR TVVLTGSAAA ACLAAPAAHA QSSVTMYGIM DAGIEFTNHA APQGGNSVKL KSGNKNTSRW GLRGVEDLGG GLKAVFRLES GIDLANGASD DGPDSIFARR ATVGLKGKWG ELSLGRNFTV TYDYMLPFDP MGYAQNYSWA TSSMATGGRK DGLFTRSSNA VRYDGEFSGF KFGALYGFGN VPGSMKTSSK YDFAVGYETG PFAAVVTFDR QNGAADSVTP ADTVNYIQGI HAGLSYDFGN LKTMAGYRNY RRTFHTTAAN QLSDMYWLGG SYQFTPTFSL IAAVYHQNIK GGTDTDPTLV SVRAQYALSK RTVLYAAGAF AIAKHDQKVG VSRDFNGYGT TQVGVTAGIQ QRF
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