Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_4224 |
Symbol | |
ID | 4453292 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008543 |
Strand | + |
Start bp | 1154148 |
End bp | 1155926 |
Gene Length | 1779 bp |
Protein Length | 592 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639696281 |
Product | glucose-methanol-choline oxidoreductase |
Protein accession | YP_837852 |
Protein GI | 116692319 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.477307 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.178232 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGCAG ACAAGAAGCC GCACGTCGAT GCGGTGATCG TCGGCTTCGG CTGGACCGGC GCGATTCTCG CGAAGGAACT GACCGAAGCG GGATTGAACG TCGTCGCGCT CGAGCGCGGC GAATATCGCG ACACCTATCC GGACGGCGCG TATCCGAACA CGATCGACGA GCTGACCTAC AACATCCGCA AGAAGCTGTT CCTCGACCTG TCGAAGACGA CCGTGTCGAT CCGTCACGGC CTGCAGGACA CCGCGCTGCC GTACCGGCAG CTCGCCGCGT TCCTGCCGGG CGAAGGCGTC GGCGGCGCGG GGCTGCACTG GTCGGGCGTG CACTTCCGGA TCACGCCGGA AGAGCTGCGC CTGCGCAGCC ACTATGAAGA GCGCTACGGC AAGAAGTTCA TCCCGGAAGG GATGACGATC CAGGATACGG GCGTGACCTA CGACGAGCTC GAGCCGCATT TCGATTTCGC CGAGAAGGTG TTCGGCACGT CGGGGCAGGC GTACAAGGTC GGCGGCAAGG TGGTCGGCGA CGGCAACGTG TTCGAGGCGA ACCGCAGCGA CAACTTCCCG CTGCCCGCGC AGCTCAATAC CTATTCGGCG CAGCGCTTCT TCGATGCCGC GCATTCGCTC GGCCTGCATC CGTACCGGCT GCCGTCGGCG AACACGTCGG GCCCGTACAC GAACCCGTAC GGCGTGCAGA TGGGCCCGTG CAACTTCTGC GGCTACTGCA GCGGCTACGC GTGCTACATG TATTCGAAGG CGTCGCCGAA CCTGAACATC CTGCCCGCGC TGAAGCAGGC GCCGAACTTC GAGCTGCGCT CGAAGTGCCA CGTGCTGCGC GTCGACCTCG ACGACACGAA GAAGCGCGCG ACCGGCGTCA CCTACGTCGA TCCGGCCGGA CGTGAAGTGC ACCAGCCGGC CGATCTCGTG ATCGTGGCCG CGTTCCAGTA TCACAACGTG CACCTGCTGC TGCTGTCGGG CATCGGCAAG CCGTACGATC CGATCTCGGG CGAAGGCGTG GTCGGCCGCA ATTTCGCGTA CCAGAACCTG TCGACGATCA AGGCGTTCTT CGACAAGGAT ACCTACACGA ACCCGTTCAT CGGCGCGGGC GGCAACGGCG TCGCGGTGGA CGACTTCAAC GCGGACAACT TCGACCACGG CCCGCTCGGC TTCGTCGGCG GCTCGCCGCT GTGGGTGAAC CAGGCCGGCG TGAAGCCGAT CAGCGGCATC GCCACGCCGC CCGGCACGCC GCAGTGGGGC TCGGCGTGGA AGAAGGCCGT CAAGGACAAC TACGCGCACA CGATCTCGAT GGACGCGCAC GGCACCAACA TGTCGTACCG CGACGTGTAT CTCGACCTCG ACCCGACCTA TCGCGATTCG TACGGCCAGC CGCTGTTGCG GATGACGTTC GACTGGAAGG ACAACGACAT CAAGATGGCG CAGTACGTGA CCGGGCAGAT GAAGAAGATC GCGGAAGCGA TGGGGCCGAA GGCGATCGGC GTGTCGACGC GCGAATTCGG CAAGCACTTC GACTCGCGCC AGTACCAGAC GACCCACCTC GTCGGCGGCG CGATCATGGG CACCGACCCG AAGACGAGCG TGCTGAACCG CTATCTGCAG TGCTGGGACG TGCACAACGT GTTCGTGATG GGCGCGTCCG CGCTGCCGCA GGGCATCGGC TACAACCCGA CCGGGATCAT CGCGGCGCTG GCCTACTGGT CGGCACGCGC GATCCGCGAG CAATACCTGA AAAATCCCGC CCCGCTGGTG ACCGTATGA
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Protein sequence | MAADKKPHVD AVIVGFGWTG AILAKELTEA GLNVVALERG EYRDTYPDGA YPNTIDELTY NIRKKLFLDL SKTTVSIRHG LQDTALPYRQ LAAFLPGEGV GGAGLHWSGV HFRITPEELR LRSHYEERYG KKFIPEGMTI QDTGVTYDEL EPHFDFAEKV FGTSGQAYKV GGKVVGDGNV FEANRSDNFP LPAQLNTYSA QRFFDAAHSL GLHPYRLPSA NTSGPYTNPY GVQMGPCNFC GYCSGYACYM YSKASPNLNI LPALKQAPNF ELRSKCHVLR VDLDDTKKRA TGVTYVDPAG REVHQPADLV IVAAFQYHNV HLLLLSGIGK PYDPISGEGV VGRNFAYQNL STIKAFFDKD TYTNPFIGAG GNGVAVDDFN ADNFDHGPLG FVGGSPLWVN QAGVKPISGI ATPPGTPQWG SAWKKAVKDN YAHTISMDAH GTNMSYRDVY LDLDPTYRDS YGQPLLRMTF DWKDNDIKMA QYVTGQMKKI AEAMGPKAIG VSTREFGKHF DSRQYQTTHL VGGAIMGTDP KTSVLNRYLQ CWDVHNVFVM GASALPQGIG YNPTGIIAAL AYWSARAIRE QYLKNPAPLV TV
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