| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_4200 |
|---|
| Symbol | |
|---|
| ID | 4453514 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008543 |
|---|
| Strand | + |
|---|
| Start bp | 1123877 |
|---|
| End bp | 1125130 |
|---|
| Gene Length | 1254 bp |
|---|
| Protein Length | 417 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 639696257 |
|---|
| Product | polysaccharide biosynthesis protein |
|---|
| Protein accession | YP_837828 |
|---|
| Protein GI | 116692295 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.404926 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGCCG TTCGAAAAAA TTTTGCGTTG TTGTTTGCGC TGCAGATCTC GACGTACGTC
GTGCCGCTCG TCACGCTGCC GCTCCTGACG CGCGTGCTCG GCCCCCAAGA GTACGGCCGG
CTATCGTTCG TGCTTGCGGT GACGACGTAT TTCATCAATC TCGCGAACTA TAGTTTCGAC
CTGACGGCAA CGCCGCGTGT CGCCCTCGCA AACGACAGGA TGGAGCGGTC GCGCATTTTC
TGGACGACGG TTTGCGCCCA ATGGGCGATC ACCGTCGCCG GCTTCGGGTT GCTCGTCGCG
CTGACCATGC TCATTCCTCA TTTTGCCGCG GAGCGCAGAG CGCTGCTGAT CGGTTTCGGG
ATGGCGATCG GTGCCGCGCT GACGCCGGGC TGGTATTTTC AGGGTATTCA GAAGCTGAGT
GTCTATAGCG TGACGGTGGT GGTGTACCGG GTACTCAGTG TCGCTGCCAT CTTCCTGTGG
GTGCGCACGG AGGACGACCT CCTGCATGCA GTCGCGATCA ATACGGCCGT GCCATTGCTG
TGCGGGATCA CGCTGCTGGC GTACCTGTTC TTTCATCGCG AGGTCGAGCG CGTTCAGGTG
CGACTTTCGG ACGTCGTCGA AGCGTTGAAA GGCGGCTTTC AGGTGTTCCT CGCCTCGACG
TCGATCTCGT TTTACGCGTC GACCAATACC GTCCTGCTGA GCATGGTTTC CGGTAACGTC
GCCGCAGGCT ATTTTGCGGC CGGTGACAAA CTCATCCGTG CCGCGGTCGG CTTGTTGCAA
CCGCTCAGGG CGGCAACCTA TCCGCACGTG ACCTACCTGA TGCATCACGC GCGCGACGAA
GCATTCGCAT TCCTGCGCAA GCTGATCGTC ATGCAAGGCG CGCTGGTGCT GGCCATGTCG
GCGACGATCT ATGCATGCGC GCCGCTGGCG GTCCGTATCC TGTACGGCAG CTCGTTTGCG
CCGACGATCG GCGTGCTGCA TTGCCTGGCG CTGGTGCCGT TCATGGCATG CATGACCGAC
CTGTTCGGCG TTCAAACGAT GTTGCCGCTC GGGATGAAGC GGGCGTTCAG CGTCATCCTG
ATCTCGTCGG GCGCGTTGAA CGTGACGTTG CTTCCTCCGC TCGCGATGCT GTTTGCCGAA
CGTGGCGCGG CGATCGCGGT GCTGATCGCC GAAACGGCCG TCGCCGTCGC GCTTGCATAC
GTCCTTCGCC GTGAACGCGT CGGCGTGCTC GATCTGTCGG CGCGTTCCGG TTGA
|
|---|
| Protein sequence | MTAVRKNFAL LFALQISTYV VPLVTLPLLT RVLGPQEYGR LSFVLAVTTY FINLANYSFD
LTATPRVALA NDRMERSRIF WTTVCAQWAI TVAGFGLLVA LTMLIPHFAA ERRALLIGFG
MAIGAALTPG WYFQGIQKLS VYSVTVVVYR VLSVAAIFLW VRTEDDLLHA VAINTAVPLL
CGITLLAYLF FHREVERVQV RLSDVVEALK GGFQVFLAST SISFYASTNT VLLSMVSGNV
AAGYFAAGDK LIRAAVGLLQ PLRAATYPHV TYLMHHARDE AFAFLRKLIV MQGALVLAMS
ATIYACAPLA VRILYGSSFA PTIGVLHCLA LVPFMACMTD LFGVQTMLPL GMKRAFSVIL
ISSGALNVTL LPPLAMLFAE RGAAIAVLIA ETAVAVALAY VLRRERVGVL DLSARSG
|
|---|
| |