| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_4184 |
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| Symbol | |
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| ID | 4453357 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia HI2424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008543 |
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| Strand | - |
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| Start bp | 1101275 |
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| End bp | 1102690 |
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| Gene Length | 1416 bp |
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| Protein Length | 471 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639696241 |
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| Product | outer membrane efflux protein |
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| Protein accession | YP_837812 |
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| Protein GI | 116692279 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01844] type I secretion outer membrane protein, TolC family |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.236948 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTGAAA CGAGGCGCAC GAATTGCGAG TCGGCGACAC CGGATGCGGG TATTTCCCTA
TCAAGATTTT CGACTAGGTG GAATCCCCGA CTTGCAACCA TGACATTGTT CGCTGTAACG
ATAGCCGGCG CGCCGGCACA CGCCCGTGCG TTCTGCCTCG ATACCGCCTA CCAGTACGCG
TCCGTGCACG ATCCGCGCTA CCTGCAGGCC CGCAGCGAAT ACGATGCGGC CCGCCAGAAA
TTTCCCGAGG CGCGTGCGCA GATGCTGCCG CAGGCCGCCG CGCAACTCGA GTGGGGGCGC
TACGGCACGC ACGCGAACCT GTTCGGCATC GACGTCAGCG GGTCGAGCAA CGCGGCATAC
GGTTCCGCTC AGGTCACGCA GGCGCTGTTC AATGTGCCCT ACCTGTACGA CATGCGGCGC
GCGACCGAGT ACGAGGAAGC GGCGAAGCAG AAGCTCGAGG TCGCGAAGCA GGACCTGATC
CTGCGGGTCG CGAACGCGTG CTTCGATCTG CTGAGCGCGC GCGAGAAACT GCAATCCGCC
GACGACGAAG TCAGCGCGCT CACGCGACTC GAAAGCGATA CGCGGCGCAT GGCGCAACTC
GGGATGAAGA CGATCGGCGA CACCGCCGAG ATCGAGGCGC GCCGCAGCCT CGCGCAATCC
GACGAGGCGC TCGCGCAGAC CGACGTCGAT GCGCGGCGCG CCCGCTACGA GACGTTGCTC
GGTTCGACGA TCGATTTCTC GCGCTGGCCG CGGCTGGCGA TGCGCGGGTC GTCGCCGCGC
ATTCCGTCCG GCGACTATGC GCCGCAGGAC AACCCCGCGT ACCGGCAGGC CTATCGCGAC
GTCCAGGTCG CGCGCCTTGC CGCGAAGCGC GTCAGCGCCG AACACTTGCC GACCGTCGAC
CTGTTCGCGT CGTATTCGCG TGGGCTCAAC CCGAACCTGC GCGGGCTCAC CGATCGTTCG
GATTTCCATC AAAGCGCGGT CGGCGTGCAG GTGACGATTC CGATCTTCTC CGGCGGCAGC
GTGTACTACC GGCAGGTCGA GGCCGAGCAC GTGACCGAGC AGTACCGCAA CCGGCTGCGC
GAGGTCGAGG AGCAACTGGG CACCGATCAC CGCGAGGCGT TGTCCGCGCT CGAATCGGTC
GGCAAGCGCA TTCGCGCGCA GCAGCAGTCG CTGCAGGCCG CGCGGCTCGC CTACGATGCG
TCGATGAAAG CGCATCAGGT CGGCTACAGC ACGACGTACG AAACGCTGAA CCTGCGGCGC
GACATCTCGG GCATCCGGCA GAAGCTGTTC GACAGCTATC TCGATGCGCT GAAGCTTCAG
TTGAAGCTGA AAAGCGTGCT CGGCACGCTC GACGAACAAT CGCTGATCGC GGTGGACAGT
TTCCTCGAAA GCAACGCGGC GAGCGATCGG GGGTGA
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| Protein sequence | MFETRRTNCE SATPDAGISL SRFSTRWNPR LATMTLFAVT IAGAPAHARA FCLDTAYQYA
SVHDPRYLQA RSEYDAARQK FPEARAQMLP QAAAQLEWGR YGTHANLFGI DVSGSSNAAY
GSAQVTQALF NVPYLYDMRR ATEYEEAAKQ KLEVAKQDLI LRVANACFDL LSAREKLQSA
DDEVSALTRL ESDTRRMAQL GMKTIGDTAE IEARRSLAQS DEALAQTDVD ARRARYETLL
GSTIDFSRWP RLAMRGSSPR IPSGDYAPQD NPAYRQAYRD VQVARLAAKR VSAEHLPTVD
LFASYSRGLN PNLRGLTDRS DFHQSAVGVQ VTIPIFSGGS VYYRQVEAEH VTEQYRNRLR
EVEEQLGTDH REALSALESV GKRIRAQQQS LQAARLAYDA SMKAHQVGYS TTYETLNLRR
DISGIRQKLF DSYLDALKLQ LKLKSVLGTL DEQSLIAVDS FLESNAASDR G
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