Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_4169 |
Symbol | |
ID | 4453255 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008543 |
Strand | + |
Start bp | 1084187 |
End bp | 1085038 |
Gene Length | 852 bp |
Protein Length | 283 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639696227 |
Product | AraC family transcriptional regulator |
Protein accession | YP_837798 |
Protein GI | 116692265 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.961188 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.0248126 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGAGCGGA TCGTAGATCG TTCGAAGGCG ACCCGCCTTC GATATCGGGT CATTGATGAT GGAATTCGGG CCGTGAGAAA TACGCTGCTA GATCCCTACG AACACATTCC CCGGAGCGTG GTCGTGCTCG CCAACGACTT TGCGGCGGGC ACGACGTTTC CGGATCACGC GCACGTGCGC GGGCAATTCG CGTTCGCGTC GCGCGGCACG ATCAGCGTGT CGACGCCGCA CGGGCGCTGG CTGGTGCCGC CGCAGCGCGC GTGCTGGGTG CCGGCCGGCG TGCGGCACGA AATGACCATG ACCGGGCCGG TCACGATGCT CAATGCGTTC GTGTCCGTCG ACGCCGCGCA GGCGGCCGGG CTGCCGGCCC AGTGCGGCGT GTATGGCGTG TCGCCGCTGC TGCGGCAACT GCTCGACGAT GCGATCGACC TGCCGGCCAT GTACGACGTC GACGGTCGCG CGGGCAAGCT GATGGATCTA CTGGTCGCGG AAATCGCGAC GATGCCGCGC CTGTCGCTGC ATGCGCCGCT GCCGGCCGAT GCGCGGCTGG CGAAGGTGTG CCGGCACCTG TTCGCGGCGC CGTCGATCGA CGCCGATCTC GACCGGGTCG CGGCCGACGC AGGCGTGAGC CGCCGCACGT TCACGCGGCA GTTCCGCGCG CAGACGGGCG TGAGTTTTGC CGCCTGGCGC CAGCAGGTCT GCATGCTCGC GGCGATTGCC CGCCTGACCG ACGGGCAGCC GGTGACGCGC GTGGCGCTCG ATCTCGGCTA CGCGAGCGCG AGTGCGTTCA CGTCGGCGTT TCGCCGCATT CTCGGCGACA CGCCGAGCCG CTATCTCGAG ATTCGTCGCT AG
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Protein sequence | MERIVDRSKA TRLRYRVIDD GIRAVRNTLL DPYEHIPRSV VVLANDFAAG TTFPDHAHVR GQFAFASRGT ISVSTPHGRW LVPPQRACWV PAGVRHEMTM TGPVTMLNAF VSVDAAQAAG LPAQCGVYGV SPLLRQLLDD AIDLPAMYDV DGRAGKLMDL LVAEIATMPR LSLHAPLPAD ARLAKVCRHL FAAPSIDADL DRVAADAGVS RRTFTRQFRA QTGVSFAAWR QQVCMLAAIA RLTDGQPVTR VALDLGYASA SAFTSAFRRI LGDTPSRYLE IRR
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