Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_4162 |
Symbol | |
ID | 4453248 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008543 |
Strand | + |
Start bp | 1075911 |
End bp | 1077815 |
Gene Length | 1905 bp |
Protein Length | 634 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639696220 |
Product | oligopeptide/dipeptide ABC transporter, ATPase subunit |
Protein accession | YP_837791 |
Protein GI | 116692258 |
COG category | [R] General function prediction only |
COG ID | [COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase |
TIGRFAM ID | [TIGR02323] phosphonate C-P lyase system protein PhnK |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.699138 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.00270054 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGACTTCGA GCCGTAACCC GTCGTCCCTG GCGCTGCCCG AGCAGCGCGT GGTGGCCGTC GACGACCTCT CGGTCACGTT CCGCCGCGAA GGCGCGACGT TCGACGCGGT GCGCAACGTG TCGTTTCACG TCGATCGCGG CGAGACGCTC GCGATCGTCG GCGAATCGGG CTCGGGCAAG TCGGTCACGT CGCTCGCGCT GATGCGGCTG GTCGAGCACG GCGGCGGCGA GATCACGAGC GGCCGGATCG CGTTCCGGCG CCGTGGCGGC GCGCTGGTCG ATCTCGCGCG GGCGAGCGCC GCGACGATGC GCGGCATCCG CGGCGCGGAC ATCGCGATGA TCTTCCAGGA GCCGATGACG TCGCTGAACC CGGTGTTCAC CGTCGGCGAC CAGATCAGCG AGGCGATCGC GCTGCACCAG TCGAAGGGCG CGGCCGAAGC CCGCGCGGAA GCGCTGCGGC TGCTCGATCT CGTGCGCATC CCCGAAGCGC GCCGCGTGTT CGCGCGCTAT CCGCACCAGC TGTCGGGCGG GATGCGGCAG CGCGTGATGA TCGCGATGGC GCTGTCGTGC CGGCCCGCGC TGCTGATCGC CGACGAGCCG ACGACCGCGC TCGACGTGAC GATCCAGGCG CAGATCCTGC AACTGGTGCG CGGGCTGCAG GACGAAATGA ACATGGGCGT GATCTTCATC ACGCACGACA TGGGCGTGGT GGCCGAAGTG GCCGACCGCG TGCTCGTGAT GTATCGCGGC GAGAAGGTCG AGGAGGGCGA GTCGGACCGC ATCTTCGCGA CGCCCGCGCA TCGCTACACG CGGGCGCTGC TCGCGGCCGT GCCGCGGCTC GGCTCGATGC AGGGCACCGA CGCGCCCGAG AAATTCCCGC TGCTGAAGGT GGACGGCACC AGCGCGACGG CCGCGGCGCC GACCACGACG TCCGCCGCGA ACGACGCGCA GCCGCCCGTC GATCACGCCG CGCCGCCGAT CCTGCGCGTG CGCGATCTCG TCACGCGCTT TCCGGTGAAG AGCGGCGTGT TCGGCCGCGT GTCGCAGTAC GTGCATGCGG TCGAACGCGT GAGCTTCGAG CTGCGCGCGG GCGAGACGCT CGCGCTCGTC GGCGAATCGG GCTGCGGCAA GTCGACCACC GGCCGTTCGC TGTTGCGTCT CGTCGAATCG CAAAGCGGCT CGATCGAATT CGACGGCCGC GACATCAGCG CGCTGAAGGG TTCGGACCTG CAGGCGTTGC GCCGCAACAT CCAGTTCATC TTCCAGGACC CGTTCGCGTC GCTGAACCCG CGCCTGACCG TCGGCTTCTC GATCATGGAG CCGCTGCTCG TGCACGGCGT CGCGAGCGGC AGCGAGGCGC AGGCGCGCGT CGACTGGCTG CTCGACAAGG TCGGCCTGCC GCCGGAGGCC GCGCGTCGCT ATCCGCACGA ATTCTCGGGC GGCCAGCGCC AGCGGATCGC GATCGCGCGT GCGCTTGCGC TGAATCCGAA GGTCGTGATC GCCGACGAAT CGGTGTCGGC GCTCGACGTG TCGGTGCAGG CGCAGATCGT CAACCTGATG CTCGACCTGC AGCGCGAGCT CGGCGTCGCG TACCTGTTCA TCTCGCACGA CATGGCCGTC GTCGAGCGCA TCAGCCATCG CGTCGCGGTG ATGTATCTCG GCCAGATCGT CGAGATCGGC CCGCGCCGCG CGGTGTTCGA GGCGCCGCAG CATCCGTACA CGAAGAAGCT GATGAGCGCG GTGCCGGTGG CCGACCCCGC GCGCCGGCAT GCGCCGCGCC AGCTTGCCGC GGACGAGATT CCGAGCCCGA TCCGCGCGGT CGGCGACGAG CCGGTCGTCG CGCCGCTCGT CGCGGTCGGC CCCGATCATT ACGTCGCGAC GCATCGCGTC GGCGGCGCGT ACTGA
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Protein sequence | MTSSRNPSSL ALPEQRVVAV DDLSVTFRRE GATFDAVRNV SFHVDRGETL AIVGESGSGK SVTSLALMRL VEHGGGEITS GRIAFRRRGG ALVDLARASA ATMRGIRGAD IAMIFQEPMT SLNPVFTVGD QISEAIALHQ SKGAAEARAE ALRLLDLVRI PEARRVFARY PHQLSGGMRQ RVMIAMALSC RPALLIADEP TTALDVTIQA QILQLVRGLQ DEMNMGVIFI THDMGVVAEV ADRVLVMYRG EKVEEGESDR IFATPAHRYT RALLAAVPRL GSMQGTDAPE KFPLLKVDGT SATAAAPTTT SAANDAQPPV DHAAPPILRV RDLVTRFPVK SGVFGRVSQY VHAVERVSFE LRAGETLALV GESGCGKSTT GRSLLRLVES QSGSIEFDGR DISALKGSDL QALRRNIQFI FQDPFASLNP RLTVGFSIME PLLVHGVASG SEAQARVDWL LDKVGLPPEA ARRYPHEFSG GQRQRIAIAR ALALNPKVVI ADESVSALDV SVQAQIVNLM LDLQRELGVA YLFISHDMAV VERISHRVAV MYLGQIVEIG PRRAVFEAPQ HPYTKKLMSA VPVADPARRH APRQLAADEI PSPIRAVGDE PVVAPLVAVG PDHYVATHRV GGAY
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