Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_4158 |
Symbol | |
ID | 4453244 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008543 |
Strand | - |
Start bp | 1069716 |
End bp | 1072136 |
Gene Length | 2421 bp |
Protein Length | 806 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639696216 |
Product | glycoside hydrolase family protein |
Protein accession | YP_837787 |
Protein GI | 116692254 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1501] Alpha-glucosidases, family 31 of glycosyl hydrolases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.00315991 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGACTTCGC TCCTTCATCC GCCCGTGTTC CGCGTCGCCA GCCACCACGC GAACCGCGTA CTGCTCGCGT CCGAGACGGG CGCCACCGTC GAAATCTTCG TGCTCGAGGA CGACATCGTG CGGGTACGCG TGCTGCCCGA CGCGACGGCG CGCACCCCGC GCACGTGGAC GATCGCGCCG GGCCTCGACG ACGTGCCGCT CGACGGGCGC GACCGCCTCG ACCTGAGCGA CTTCACGCTA CCCCACTACG ACTTCGCCGA GGACGACGAC GCCGTGCGCA TCGAAACCGC GCAGATCCGG CTCGCGGTGC GCCGGCAAGG CGGCCACTGC ACGTGGTCGC TGCGCGGCGC GGACGGCGCA TGGCGCGTCG CGCTCGCCGA CCGCGCGACG CAGGCGTACA ACTTCGGCTG GTGGGACGAT CGCGCGTATC ACTACGTCGC CCGCGAGCGC GGCGACCAGG TGTTCGGCCT CGGCGAACGC GCGGGCGAAC TCGATCGCAC GGGCGCCCGC TTCGAGATGC GCAACATCGA CGCGATGGGC TACAGCGCGA AGCACACCGA CCCGCTGTAC AAGCACATCC CGTTCTACAT CACGTGGTCG CCCGATGCGG GCCAGGGCTT CGGGCTGTTC TACGACACGC TGTCCGACTG CGCGTTCGAC ATGGGCCGCG AGCTCGACAA CTACCACGGG CTCTATCGCT ACTTCGTCGC CGAACACGGC GATCTCGACT ACTACTTCAT CGCGTCGCCC GCTACGCCGC TCGCGGCCGC GCGGCGCTTC ACGTGGCTCA CCGGGCGCCC CGCGCGCACG CCGAAATGGG GGCTCGGCTA TTCGGGCTCC ACGATGAGCT ACACCGACGC GCCGGACGCG CAGCAGCAGA TGAACCAGTT CGTCGAGCAG TGCGACACGC ACGACATCCT GTGCGATTCG TTCCACCTGT CATCGGGTTA TACGTCGATC GGCGCGAAGC GCTACGTGTT CAACTGGAAC CGCGACAAGT TTCCCGATGC GAAAGGCTTC GTGCAGCATT ACCGCGACAA CGGCATCCGC CTGTGCGCGA ACATCAAGCC GTGCCTGCTG CGCGACCATC CCGCGTTCGA CGACGCCGCG CGGCGCGGGC TGCTGATCCG TTCCGCATCG GGCGAGCCCG CATGGGTGCA GTTCTGGGAC GAAGTCGGCG CGTACATCGA TTTCACGCAG CCGGACGCGT ACCGCTGGTG GCGCGAGCAG GTCACGTCGG CGCTGCTGGA ATACGGGATC GAATCGACCT GGAACGACAA CAACGAATAC GAGATCTGGT CGCCCGACGC GATCGCGCAC GGCTTCGGCC AGCCGTTCCC GGCGCGCGAG GCGAAGGTGC TGCAGACGAT GCTGATGATG CGCGCGTCGC GCGACGCGCA GCGCGCACAT GCGCCGGCGC GGCGGCCGTT CCTCGTGTCG CGCTCGGGCG GCGCGGGCAT GCAGCGCTAC GTGCAGACGT GGTCGGGCGA CAACTACACG TCGTGGGAAA CGCTGCGCTA CAACCTGAAG ATGGGCCTCG GCCTCGCGCT GTCGGGCGTG TCGAACATCG GCCACGACAT CGGCGGCTTC TCGGGCCCTG CGCCGTCGCC CGAATTGCTG CTGCGCTGGG TGCAGTTCGG CATCTTCATG CCGCGCTTCA GCATCCACTC ATGGAACGAC GACGGCACCG TCAACGAACC GTGGATGTAC CCCGAGATCA CCGCGCAGAT CGCGTCGCTG ATCAAGCAGC GCTACCGGCT GCTGCCGTAC CTCTATCACC TGCTGTGGCT GTCCACGACG CGCTACGAGC CCGTGCTGCG GTCGACCCTC GCCGATTTCC CCGGCGATGC GCGCTGCTAC GACGCGTGCG ACGACATGAT GCTCGGCGAC GCGCTGCTGG TCGCGCCGGT CGTCGAGCCC GGCCAGACCG AACGCACGGT GTACCTGCCG TCGGGCGCAC GCTGGACGTG CTGCGCGAGC GCGCAGTCGT TCGACGGCGG CGCGAGCGTG ACGCTCCCCG CACCGCTCGA CACGCCGGTG ATGCTGCTGC GCGAAGGCCG CGTGCTGCCG CTGAACGTCG CGGAACAGCA TTTCGGTACG CGCGCCGACA CGCGTGGCTT CCTCGTCGCA CCGCGGATCG AGGACGGCGT CGCGTACGGC GAATGCGTGG AGGACGATGG CGAGACCGAA GCATGGCGCG ACGGCGAATA CGGCCTGTGG CGCATCGAGA CCGGCCGCGA GGCATCTGGC GTGCTCGGCG TGTCGGTCCG CTGGGACGGC CACCCGGCAC GTCCGTCCGA CCGCGTCGAA ATCCTGCTGC CCGCGTCGCT GCAAGGCGCG ATTGCCGTGC GCGGCGCGCG TGTCGAGCAG GATGCGCAGG ACGGCGCGTG GCGCCGCCTC GTCGTCGCGT TCGATCAATG A
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Protein sequence | MTSLLHPPVF RVASHHANRV LLASETGATV EIFVLEDDIV RVRVLPDATA RTPRTWTIAP GLDDVPLDGR DRLDLSDFTL PHYDFAEDDD AVRIETAQIR LAVRRQGGHC TWSLRGADGA WRVALADRAT QAYNFGWWDD RAYHYVARER GDQVFGLGER AGELDRTGAR FEMRNIDAMG YSAKHTDPLY KHIPFYITWS PDAGQGFGLF YDTLSDCAFD MGRELDNYHG LYRYFVAEHG DLDYYFIASP ATPLAAARRF TWLTGRPART PKWGLGYSGS TMSYTDAPDA QQQMNQFVEQ CDTHDILCDS FHLSSGYTSI GAKRYVFNWN RDKFPDAKGF VQHYRDNGIR LCANIKPCLL RDHPAFDDAA RRGLLIRSAS GEPAWVQFWD EVGAYIDFTQ PDAYRWWREQ VTSALLEYGI ESTWNDNNEY EIWSPDAIAH GFGQPFPARE AKVLQTMLMM RASRDAQRAH APARRPFLVS RSGGAGMQRY VQTWSGDNYT SWETLRYNLK MGLGLALSGV SNIGHDIGGF SGPAPSPELL LRWVQFGIFM PRFSIHSWND DGTVNEPWMY PEITAQIASL IKQRYRLLPY LYHLLWLSTT RYEPVLRSTL ADFPGDARCY DACDDMMLGD ALLVAPVVEP GQTERTVYLP SGARWTCCAS AQSFDGGASV TLPAPLDTPV MLLREGRVLP LNVAEQHFGT RADTRGFLVA PRIEDGVAYG ECVEDDGETE AWRDGEYGLW RIETGREASG VLGVSVRWDG HPARPSDRVE ILLPASLQGA IAVRGARVEQ DAQDGAWRRL VVAFDQ
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