| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_4157 |
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| Symbol | |
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| ID | 4453243 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia HI2424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008543 |
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| Strand | - |
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| Start bp | 1068415 |
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| End bp | 1069602 |
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| Gene Length | 1188 bp |
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| Protein Length | 395 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639696215 |
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| Product | porin |
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| Protein accession | YP_837786 |
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| Protein GI | 116692253 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.142098 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.00226863 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAAAGCAC CCGTCAACCG TTATGCAATC CTGATTTTAT CGGCCGCCTC GCTCGGCACG
ACCGCCGCCC ACGCACAGAG CAGCGTCACG CTGTACGGCG TGGTCGACGA TTCGCTCGCG
TACGTGAACA ACCAGCAGGG GCACTCGAAC ATCTACATGC GCGACGGCAA CCTGTATGCG
TCGAAGTTCG GGCTGCGCGG CGACGAGGAT CTCGGCGGCG GCACGCACGC GATCTTCGAC
CTGCAGGCCG GTTTCAACCT GAATACGGGC GCGCAGGCCG CCGCCGGCAC GCTATTCAAT
CGCCAGGCCT TCGTCGGCCT GCGCAACGCC AGCTACGGTA CGGTCACGGC CGGTCGCCAG
TACACGCCCT ACTTCCTGTT CGTCGGCCCG TACGCGTCGA GCAGCTGGCT GACCGGCGCC
ACCGGCGCGC ATCCGGGCGA CATCGACGGC CTCGACACCA CGATCCGCGT GAACAATTCG
GTTACCTATA CGTCGCCGAC CTTCGCCGGG CTGACCGCGA GCGCGATGTA CGCATTCGGC
GGCATTGCGG GCGCGACCGG CAAGGGCAAC ACGTTCAGCG CCGCGCTGCG CTACGCGAAC
GGGCCGATCG GGATCGCGGC CGGCTACCTG CGGATCAACA GCTCGGGCTC GTCCGCGGGC
TTCCTGAACC CGGCCACCGC ATCGTCGGGC AGCTTCGCGG TGTCCGTGCT GAACCAGGGC
TACCTGAGCG CGAAAGCGGT CGAACAGGTG GCGGCGGCCG GCAACTACAC GCTCGGCGAC
CTGACGATGG GGCTCAACTA TTCGAACGTG AAGTACCTGC CCGGCAACGG CTCGGCGTTC
ACCGACACGG CCGTGTTCAA CACCTACGGC GCGCTTGCCG CATACCGCTT CACGCCGACG
TTCTCGGTGG CCGGCGCATT CGCGTACACG CTCGCATCGA AGGCGAACGG TGTCGCGAGC
GCGGCCCGCT ATCAACAATA TTCGCTGAAG GAGTCGTACA GCCTGTCGAA ACGCACGACG
CTCTACGCGC TGCAGGCGTA CACGCATTCG AGCGGGCAGA CGCTCGGCGC GCAAGGCGCC
GGGCACATCG TCGACGCGGC GCCGATCGTC GGCGATTCGC AGCAGCTCAC GCCGTCGACG
ACGCATGGCC AGTTCGTCGG CATGGCCGGG ATCGCCGTCA CGTTCTGA
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| Protein sequence | MKAPVNRYAI LILSAASLGT TAAHAQSSVT LYGVVDDSLA YVNNQQGHSN IYMRDGNLYA
SKFGLRGDED LGGGTHAIFD LQAGFNLNTG AQAAAGTLFN RQAFVGLRNA SYGTVTAGRQ
YTPYFLFVGP YASSSWLTGA TGAHPGDIDG LDTTIRVNNS VTYTSPTFAG LTASAMYAFG
GIAGATGKGN TFSAALRYAN GPIGIAAGYL RINSSGSSAG FLNPATASSG SFAVSVLNQG
YLSAKAVEQV AAAGNYTLGD LTMGLNYSNV KYLPGNGSAF TDTAVFNTYG ALAAYRFTPT
FSVAGAFAYT LASKANGVAS AARYQQYSLK ESYSLSKRTT LYALQAYTHS SGQTLGAQGA
GHIVDAAPIV GDSQQLTPST THGQFVGMAG IAVTF
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