| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_4156 |
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| Symbol | |
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| ID | 4453242 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia HI2424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008543 |
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| Strand | - |
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| Start bp | 1066095 |
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| End bp | 1068125 |
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| Gene Length | 2031 bp |
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| Protein Length | 676 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639696214 |
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| Product | choline/carnitine/betaine transporter |
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| Protein accession | YP_837785 |
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| Protein GI | 116692252 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1292] Choline-glycine betaine transporter |
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| TIGRFAM ID | [TIGR00842] choline/carnitine/betaine transport |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.87836 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.0109397 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGCCA TGCCGGATTC CCGTCCCTCG CCCCGCACGA CATTCAAGCC GCAGGTCGTC
CTGCCCGCGC TCGCCGTGAT CGGCGCGCTA CTCGTCGTGT GCGCACTGCA CCCGAGCGAA
GCCGGCGCAC TGTTCTCCGC CGGCCAGCAA TGGGTTATCG CCCGGTTCGA CTGGTTCTAC
GTGCTCGCCG TCACCGGCTT CCTCGTGTTT CTCGTGCTGA TCGCCGCCAG CGACTTCGGC
AATATCCGGC TCGGCCCCGA CGATGCCGAA CCGGAATTCA GCTTCGTGTC GTGGACGGCG
ATGCTGTTCG CGGCCGGCAT GGGCATCGGC CTGATGTACT TCGGCGTCGG CGAGCCGATG
CAGCATTTCC TGAAGCCGCC CACCGTCGAC CCCGGCACGC CCGCCGCCGC GCGCGAGGCG
ATGCTGATGA CCTTCTTCCA CTGGGGCTTC CATGCGTGGG CGATCTACGG GCTGATGGGG
CTCGTGCTCG CGTACTTCGG CTTCCGCTAC AACCTGCCGC TGACGCTGCG CTCCGGGCTG
TATCCGGTGC TGCGCGAGCG CATCAACGGC TGGATCGGCC ACACCGTCGA TGCGTTCGCG
CTGGTCGGCA CGGTCGCCGG GATCGCAACG ACGCTCGGCT ACGGCGTGAT GCAGCTGAGC
GCGGGCCTGC ATACGGTCGC CGGATGGGAC ACGGGCAGCA ACCTGTTCCG CATCGGGCTC
GTCGCGGCGG TCGTGGTCCT CGCGGGCGTA TCGGCCGCGA CCGGCCTCGA CAAGGGCGTG
CGCCGGCTGT CCGAACTGAA CCTGCTGCTC GCATTCCTGC TGCTCGCCTT CGTGGTGGTC
GCGGGCCCGA CGGCCTTTCT GCTGCGCGCG CTCGGCGACA ACATCGGCCA GTACCTGTCG
AGCCTCGTCG ACCTGTCGTT CCGCACCTAT GCGTACGCGC CGCCGCGCGA GGAAGGCTGG
TTCGGCGGCT GGACGATCCT CTACTGGGCG TGGTGGGTGT CGTGGTCGCC GTTCGTCGGC
ATGTTCATCG CGCGCATCTC GCGCGGCCGC ACGATCCGCC AGTTCGTGAT CGGCGTGCTG
CTCGTGCCGA CCGCGTTCAA CCTCGTGTGG ATGACCGTGT TCGGCAACAG CGCGATCTGG
CTCGATACGC ACGGCGCGGC CGGCGCGCTC GCGCAGACGG CGACCAACGT CGATGCGCTG
CTGTTCCGCT TCTTCGATTT CCTGCCGTTG CCGCAACTGC TGTCGATCGT CGCGATCGTG
CTGATCGCGG TGTTCTTCGT CACGTCCGCC GATTCGGGCG CGTTCGTGAT CGACCAGATC
GCGACGCGCG GCAATGCGCA TTCGCCGGTC TGGCAGCGGC TGTTCTGGGC CGCGCTGCTC
GGCGTGACGG CCGCGGTGCT GCTCGTCGCG GGCGGGCTCG GCGCGCTGCA GGCGATGACG
CTGATCGCCG CGCTGCCGGT CGCCATCATC ATGCTCGCGC TGTGCTACGG GCTGTGGCGC
GGGCTCGCGG CCGACCGCGC GCACTACTCG CAGGACGTTG CGCCTGCAAC GAGCTTCTGG
ACCGGCCAGC ACTGGCGCCA TCGCCTGACG CACATCCTGC GGCAGACGAC CGAGGCCGAG
GCGCGCCAGT TCGTCGCGGA AACGGTCGAA CCCGCGCTGC GCAAGGTCGC CGACGAGCTG
CGCGCGAGCG GCGTCGATGC GCACGTGCAG CGCGACAGCG ACGATGCAGT GCGGCTCACC
GTACCGACCG CCGAACACCG CGATTTCGTG TACGGCGTGC GCGTCACCGC GAAATCCGCG
GCCGCGTTCC TGGTGCGCGA GGCGGCCGAG CCGGACGAGA CGCGTGCGCA TGTCCATGGC
ATCGTCACGT TCTTCGAGGA CGGCCGGCTC GGCTACGACA TCGAATACCT GCGCGGCGAC
GAAGTGATCG CCGACGTGCT GCGCCAATAT GAACGCTACG TGTCGCTCGC GGCAGACACC
CGCACGCATC TGCTGAGCCG GGCACCGGGG CACGCGACGG AGGCCGAATG A
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| Protein sequence | MPAMPDSRPS PRTTFKPQVV LPALAVIGAL LVVCALHPSE AGALFSAGQQ WVIARFDWFY
VLAVTGFLVF LVLIAASDFG NIRLGPDDAE PEFSFVSWTA MLFAAGMGIG LMYFGVGEPM
QHFLKPPTVD PGTPAAAREA MLMTFFHWGF HAWAIYGLMG LVLAYFGFRY NLPLTLRSGL
YPVLRERING WIGHTVDAFA LVGTVAGIAT TLGYGVMQLS AGLHTVAGWD TGSNLFRIGL
VAAVVVLAGV SAATGLDKGV RRLSELNLLL AFLLLAFVVV AGPTAFLLRA LGDNIGQYLS
SLVDLSFRTY AYAPPREEGW FGGWTILYWA WWVSWSPFVG MFIARISRGR TIRQFVIGVL
LVPTAFNLVW MTVFGNSAIW LDTHGAAGAL AQTATNVDAL LFRFFDFLPL PQLLSIVAIV
LIAVFFVTSA DSGAFVIDQI ATRGNAHSPV WQRLFWAALL GVTAAVLLVA GGLGALQAMT
LIAALPVAII MLALCYGLWR GLAADRAHYS QDVAPATSFW TGQHWRHRLT HILRQTTEAE
ARQFVAETVE PALRKVADEL RASGVDAHVQ RDSDDAVRLT VPTAEHRDFV YGVRVTAKSA
AAFLVREAAE PDETRAHVHG IVTFFEDGRL GYDIEYLRGD EVIADVLRQY ERYVSLAADT
RTHLLSRAPG HATEAE
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