Gene Bcen2424_4095 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_4095 
Symbol 
ID4452082 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008543 
Strand
Start bp991629 
End bp992795 
Gene Length1167 bp 
Protein Length388 aa 
Translation table11 
GC content69% 
IMG OID639696153 
Productextracellular ligand-binding receptor 
Protein accessionYP_837724 
Protein GI116692191 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATCG CTTTCTTTTC CACCCATCTC GCCTTCTCCG CGGCCGCCCT GGTCGCCACC 
GTTCCCGCGT TCGCGCAGTC CGCTCCGCAG ACGGTCCTGA TCGGTCTCGC CGCGCCGCTC
ACCGGCCCGT CCGCGCGGAT CGGCAAGGAC TTGCAGAACG GCGCGCAACT CGCGATCGAC
GACGCGAACG CGAAGCATCC GACCATCGGC GGCAAGCCGG TCGTCTACAA GCTCGTCGCG
GCCGACGATC AGTCCGACCC GCGCACGGCC GTCGCGGTCG CGCAGCAACT CGTCGACCAG
CACGTGATCG GCGTCGTCGG TCACTGGAAC ACGGGCTGCA GCGTGCCGGC GTCGCGCGTG
TACCGCGATG CGGGCATTCC ACAGATCGCG CCGGCCTCCA CCGGTCATCA ATACACGCAG
CAGGGCTACG CGACGGCGTT CCGCATCATG GGTCACGACG ATGCAGGTGG ACACTTCACC
GGTGCGTACG CGGTGAAGAC GCTGAAGGCG AGGCGCATCG CGGTGCTCGA CGATCGCACG
TCGTTCGGCG CGGGGCTGGC CGACCAGTTC ATCAAGGGCG TGCAGGCGAA CGGCGGCACG
ATCGTCGATC GTCAGTACGT GAACGACAAG ACGACCGACT TCAGCGGCGT GCTGACCGCG
ATCAAGGGCA AGCGCGCGGA TCTCGTGTTC TTCGGCGGCC TCGACGCGCA GGCCGCGCCG
ATCGCGCGCC GGATGCGCCA GCTCGGCGTG AACGCGCCGC TGCTCGGTGC GGGCGGCTTC
GTGAGTCAGA CCTTTCTGTC GCTCGCCGGC AAGGACGGCG ACGGCGTGAC GGCGCTCGAA
CCGGGCCTGC CGCTCGACCG GATGCCGGGC GGCAACGCGT TCGACACGCA ATACCAGGCA
CGCTTTCACG CGCCGATCGA ACTGCATGCG CCGTTCGCGT ACGACGCGGC CGCCACGCTG
ATCGCGGCCG CGCAGAAGGC CGGCACGACC CAGCCGGCGA AGCTGGTCGC GGCCGTTCGT
GCGATCGTGC GGCCCGGCGT GACCGGGCGC ATCGCGTTCG ACGCCGAAGG CAACCTGAAG
GACCCGGCCT TCACGATCTA CCAGGTGCGC GGCGGCAAGT GGGCCGTCGT CGACGTGCTC
GGCGGCTCGC GCACCGCGGC CAAGTAA
 
Protein sequence
MKIAFFSTHL AFSAAALVAT VPAFAQSAPQ TVLIGLAAPL TGPSARIGKD LQNGAQLAID 
DANAKHPTIG GKPVVYKLVA ADDQSDPRTA VAVAQQLVDQ HVIGVVGHWN TGCSVPASRV
YRDAGIPQIA PASTGHQYTQ QGYATAFRIM GHDDAGGHFT GAYAVKTLKA RRIAVLDDRT
SFGAGLADQF IKGVQANGGT IVDRQYVNDK TTDFSGVLTA IKGKRADLVF FGGLDAQAAP
IARRMRQLGV NAPLLGAGGF VSQTFLSLAG KDGDGVTALE PGLPLDRMPG GNAFDTQYQA
RFHAPIELHA PFAYDAAATL IAAAQKAGTT QPAKLVAAVR AIVRPGVTGR IAFDAEGNLK
DPAFTIYQVR GGKWAVVDVL GGSRTAAK