| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_4052 |
|---|
| Symbol | |
|---|
| ID | 4453269 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008543 |
|---|
| Strand | - |
|---|
| Start bp | 945204 |
|---|
| End bp | 945842 |
|---|
| Gene Length | 639 bp |
|---|
| Protein Length | 212 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639696110 |
|---|
| Product | isochorismatase hydrolase |
|---|
| Protein accession | YP_837681 |
|---|
| Protein GI | 116692148 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG1335] Amidases related to nicotinamidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 0.692371 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAGCG AACCGATTCG CGACCCCGCG AACGACCACC TGCTCACCCC GCAGAACGCC
GCGTTCATCG TCATCGATTA CCAGCCGGTC CAGGTGAACT CCATCGCGTC GATGGATCGC
CAGCTGCTGA TCAACAACAT CGTCGGCGCA TCGAAGGCGG CGGTCGCGTA CGACCTCCCG
ATCGTCCACT CGACCGTCAA CGTGAAGACC GGGCTGAACA AGCCGCCGAT CCCGCAACTG
CGCGCGGCGC TCGAAGGCTA TCCGACCTAC GACCGCACGA GCATCAACTC GTGGGAAGAC
GTCGAGTTCC GCCAGGCCGT CGAGGCGACC GGCCGCAAGA AACTGATCAT GACCGCGCTG
TGGACCGAGG CATGCCTGAC CTTCCCGGCG CTCGATGCGC TGAAGGCCGG CTACGAGGTG
TACGTGGTCG TCGATGCGGT CGGCGGCACG TCGGTCGCCG CGCACGAAGC GGCGCTGCGC
CGCATCGAGC AGGCCGGCGG CCAGATGATC AGCGTCGCGC AGCTGTTCTG CGAATTGCAG
CGCGACTGGG CGCGCAGCGC CACCGTGCCG GCGTTCATCA ACCTGTTCAT CGAAACCGGC
GGCACGGCCG GCATCCAGTT CTCGTACGAC AAGAGCTGA
|
|---|
| Protein sequence | MASEPIRDPA NDHLLTPQNA AFIVIDYQPV QVNSIASMDR QLLINNIVGA SKAAVAYDLP
IVHSTVNVKT GLNKPPIPQL RAALEGYPTY DRTSINSWED VEFRQAVEAT GRKKLIMTAL
WTEACLTFPA LDALKAGYEV YVVVDAVGGT SVAAHEAALR RIEQAGGQMI SVAQLFCELQ
RDWARSATVP AFINLFIETG GTAGIQFSYD KS
|
|---|
| |