| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_4051 |
|---|
| Symbol | |
|---|
| ID | 4453268 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008543 |
|---|
| Strand | - |
|---|
| Start bp | 944280 |
|---|
| End bp | 945080 |
|---|
| Gene Length | 801 bp |
|---|
| Protein Length | 266 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639696109 |
|---|
| Product | haloacid dehalogenase, type II |
|---|
| Protein accession | YP_837680 |
|---|
| Protein GI | 116692147 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
|---|
| TIGRFAM ID | [TIGR01428] 2-haloalkanoic acid dehalogenase, type II
[TIGR01493] Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGATCG AACCGGCGCC GCGCCATCCG GCGGCACGGC GATGTGAACC CTCATCGAAC
GACCTTCACT GGATCACCAT GACGAACCCT GCCGAAATCA AGGCGCTCGT TTTCGATGTC
TTCGGAACGA TCGTCGACTG GAGAAGCGGT GTCGCGCGCG GCACCGCCGC GTTCCTGGAT
CGCCACGCGC CGACACTCGA CCCGTTCGCG TTCGCCGATG CGTGGCGCGC CGAGTATTCG
CCGTCGATGG AAGAAATCCG CAGCGGACGC CGCCGTTACG TGCGGCTCGA CGTGCTGCAT
CGCGAGAACC TGGTGCGCAC GCTCGACCGC TTCGGGATCG TCGACGTGCC GGAGGCCGAC
ATCGACGCGC TCAATCTCGC GTGGCATCGG CTCGATCCGT GGCCGGATGC CGTCGCCGGG
CTGCACCGGC TGAAGCAGCG CTACATCATC GCGCCGCTGT CCAACGGCAA TATCCGGCTG
ATGGTCGACG TCGCGAAGCA TGGCGGGCTG CCGTGGGACG CGATTCTCGG CGCCGAGGTC
GCCCGCGCGT ACAAGCCGTC GCCGGCGGTC TACACCGAAG CGGTCGAGAT TCTCGGCCTC
GCGCCGGCCG AGCTGTGCCT GGTGGCCGCG CACAACGGCG ATCTTGGCGC CGCGCGCCGG
CTCGGGCTGT CGACCGCGTT CGTGCTGCGG CCGACCGAGC ACGGGCCCGG CCAGACGACC
GACCTGCAAG CCGACGATGC GTGGGATTTC GACGTCAGGG ACCTGAACGA ATTGGCGGAT
CGGCTGGGCT GCCCGCGTTG A
|
|---|
| Protein sequence | MSIEPAPRHP AARRCEPSSN DLHWITMTNP AEIKALVFDV FGTIVDWRSG VARGTAAFLD
RHAPTLDPFA FADAWRAEYS PSMEEIRSGR RRYVRLDVLH RENLVRTLDR FGIVDVPEAD
IDALNLAWHR LDPWPDAVAG LHRLKQRYII APLSNGNIRL MVDVAKHGGL PWDAILGAEV
ARAYKPSPAV YTEAVEILGL APAELCLVAA HNGDLGAARR LGLSTAFVLR PTEHGPGQTT
DLQADDAWDF DVRDLNELAD RLGCPR
|
|---|
| |