Gene Bcen2424_4038 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_4038 
Symbol 
ID4453135 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008543 
Strand
Start bp929769 
End bp930416 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content69% 
IMG OID639696096 
Productisochorismatase hydrolase 
Protein accessionYP_837667 
Protein GI116692134 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1335] Amidases related to nicotinamidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0636814 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGATC TTTCCCGTCA CGCCGAAGCG AACGTGTATC GCCAGCAGGG TTTCGGCACG 
CCGCTTCCGC CGCACGGCAA CATTGGACTG CTGATCGTCG ATTTCGTGGT CGGCTTCGCC
GATCCCGCGA CGTTCGGCGG CGGCAACATC GCGCCGGCGA TCGCGCGCAC GACGAAGGCG
CTCGCGCTCG CCCGCGAACG CGGCTGGCCG GTCGCGCACA GCCGCATCGT GTATGCGGAC
GACGGCAGCG ACGACAACGT GTTTTCGCTG AAGGTGCCCG GCATGGCGAC GCTGACCGAG
CATCATCCGA ACAGCGCGAT CGTGCCCGAG CTCACGCCGG CGCCGGGCGA ACTCGTCGTG
CGCAAGACCG TGCCGTCCGC GTTCTTCGGC ACGCAGCTCG CGCCGTGGCT CGCGCAGCGC
GCGGTGCAGA CGCTGCTCGT CGCGGGCGCC GTGACGAGCG GCTGCGTGCG CGCGAGCGTC
GTCGACGCGA TGTCGCACGG GTTTCGCCCG CTCGTGCTCG CCGATTGCGT CGGCGATCGC
GCGATCGCGC CGCACGACGC GAACCTGTTC GACATGCAGC AGAAATATGC GGCCGTGATG
CCGCTCGACG ATGCGATCGC GGCAATCGAT GCCGTGCAGG CACGCTGA
 
Protein sequence
MNDLSRHAEA NVYRQQGFGT PLPPHGNIGL LIVDFVVGFA DPATFGGGNI APAIARTTKA 
LALARERGWP VAHSRIVYAD DGSDDNVFSL KVPGMATLTE HHPNSAIVPE LTPAPGELVV
RKTVPSAFFG TQLAPWLAQR AVQTLLVAGA VTSGCVRASV VDAMSHGFRP LVLADCVGDR
AIAPHDANLF DMQQKYAAVM PLDDAIAAID AVQAR