Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_4030 |
Symbol | |
ID | 4453127 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008543 |
Strand | - |
Start bp | 921008 |
End bp | 922558 |
Gene Length | 1551 bp |
Protein Length | 516 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639696088 |
Product | permease for cytosine/purines, uracil, thiamine, allantoin |
Protein accession | YP_837659 |
Protein GI | 116692126 |
COG category | [F] Nucleotide transport and metabolism [H] Coenzyme transport and metabolism |
COG ID | [COG1953] Cytosine/uracil/thiamine/allantoin permeases |
TIGRFAM ID | [TIGR00800] NCS1 nucleoside transporter family |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.0915622 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAGGAG ACAACGGCGT GCAACTGGAA GCCATTCACC GCGCGGGCCT CGGGCTCGGC GCGGACGACG CATCGCATCG AACCGACCCG GCCGCGCGCG ATCCCGCGCT GAGCCCGCGG CTGCACAACC CCGATCTCGC GCCGACCCAG GCCGAAGGCC GGACCTGGGG CCGCTACAGC ATCTTTGCGC TATGGACCAA CGACGTGCAC AACATCGCGA ACTACTCGTT CGCGATCGGG CTGTTCGCGC TCGGCCTGTC GGGCTGGCAG ATGCTCGCGT CGCTCGCGAT CGGCGCGGTG CTCGTGTACG GCTTCATGAA CCTCACCGGC TACATGGGCC AGAAAACCGG CGTGCCGTTC CCGGTGATCA GCCGGATGAG CTTCGGCATC TACGGCGCGA TGCTGCCCGC GATGATCCGC GCGGTGATCG CGATCGCATG GTTCGGTATC CAGACCTATC TCGCGTCCGT CGTGCTGCGC GTGCTGCTCA CCGCGATCTG GCCGGGCCTC GCCGCGTTCG ACCAGAATGC GATCTTCGGG CTGTCGACGC TCGGCTGGAT CACGTTCGTC GCGATCTGGC TGGTGCAGAT CGGCATCCTC ACGTACGGGA TGGAAATGGT CCGCAAGTAC GAGGGGCTCG CCGGCCCGGT GATCCTCGTC ACGACGCTGT CGCTCGCCGC ATGGATGTTC AGCCGCACCG GCGGCCACCT CGCGATGTCG ATCGGCAAAC CGATGAGCGG CCTGAAGATG TGGACGGAAA TCTTCGCGGG CGGCTCGCTG TGGCTCGCGA TCTACGGCAC GCTGGTGCTC AACTTCTGCG ATTTCGCCCG CTCGTCGCCG AGCCCGAAGA CGGTGCGCGT CGGCAACTTC TGGGGGCTGC CGGTCAACAT CCTCGTATTC GCGACGATCA GCTTCGTGCT TGCCGGCGCG CAGTTCAAAC TGAACGGCCA CATCATCCAC AGCCCGACGG AAATCATCGC GACGGTGCCG AACAAGCTGT TCCTCGTGCT CGGCTGCCTC GCCTTCCTGA TCGTGACGGT GGCCGTGAAC ATCATGGCGA ACTTCGTCGC GCCGGCCTTC GTGCTGACGA GCCTCGCGCC GCATCGCCTG TCGTTCCGCC GCGCGGGCCT GATCAGCGCG ACGATCGCCG TGCTGATCCT GCCGTGGAAC CTGTACAACA GCCCGATCGT GATCGTCTAT TTCCTGTCCG GCCTCGGCGC GCTGCTCGGC CCGCTGTACG GGATCATCAC GGTCGACTAC TGGCTCGTGC GCAAGCAGCG CGTGAACGTG CCCGATCTCT ACACCGAAGC GCCGAGCGGC GCCTACTTCT ACACGCGCGG CGTGAACCGC AAGGCGCTCG CGGCACTCGT GCCGTCCGCG CTGATCTCGA TCACGCTCGC CGTCGTGCCG GCCTTCAGCG CGATGACGCC GTTCTCGTGG CTGCTCGGCG CAGCGATCGC GGGCAGCGTG TACTGGCTGC TGGCCGATCG CAAACGGATC TACGAAGCGC GCTCGGGCGA GCACATCGCG GTCCCCTGCG CACAACACTG A
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Protein sequence | MEGDNGVQLE AIHRAGLGLG ADDASHRTDP AARDPALSPR LHNPDLAPTQ AEGRTWGRYS IFALWTNDVH NIANYSFAIG LFALGLSGWQ MLASLAIGAV LVYGFMNLTG YMGQKTGVPF PVISRMSFGI YGAMLPAMIR AVIAIAWFGI QTYLASVVLR VLLTAIWPGL AAFDQNAIFG LSTLGWITFV AIWLVQIGIL TYGMEMVRKY EGLAGPVILV TTLSLAAWMF SRTGGHLAMS IGKPMSGLKM WTEIFAGGSL WLAIYGTLVL NFCDFARSSP SPKTVRVGNF WGLPVNILVF ATISFVLAGA QFKLNGHIIH SPTEIIATVP NKLFLVLGCL AFLIVTVAVN IMANFVAPAF VLTSLAPHRL SFRRAGLISA TIAVLILPWN LYNSPIVIVY FLSGLGALLG PLYGIITVDY WLVRKQRVNV PDLYTEAPSG AYFYTRGVNR KALAALVPSA LISITLAVVP AFSAMTPFSW LLGAAIAGSV YWLLADRKRI YEARSGEHIA VPCAQH
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