| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_4028 |
|---|
| Symbol | |
|---|
| ID | 4453125 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008543 |
|---|
| Strand | - |
|---|
| Start bp | 919016 |
|---|
| End bp | 920200 |
|---|
| Gene Length | 1185 bp |
|---|
| Protein Length | 394 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 639696086 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_837657 |
|---|
| Protein GI | 116692124 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.00259688 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGGGCCC CGCTAGATCC GACCGCCCTG CCCCGCGGCA CGTTCGATGC CGCGGGCGCG
CTCGACGTGC TCGATGCACG GCTGATGCGC ATCCTGCTCG TGCTGCTGAC CGAGCGCACC
GTGTCGCGTG CGGCCGTGCG CCTGAACATG TCGCAGCCGG CGACGAGCGC CGCGCTCAAG
CGCCTGCGCA CGCTGCTCGG CGATCCGCTG CTCGTACGCA GCCGCTACGG GATGGTGCCG
ACCGAGTTCG GCGCGCGGTT GATCGAGCCG CTGCGCAACG CGCTGCGCGT GATCGACTTC
ATCCGCATCC AGCAGCCGAC GTTCGACGCG CGCACGTCGG TGCGCACCTA CCGGATCGGC
TGCCCCGACT ACCTGAATGT CCTGTTCGTG CCGAAGCTCG TCGCGCTGTT TCGCGAGCGT
GCGCCGCACG CGCAACTGGT GTTCCATCCG CTCGGCGACG GGTTCGACGA CGAGCGCGCG
CTGGCCGACG GCGAGCTCGA CGTCGTGATC GACAACCGGC CCGTGCGCCG GTCGCGCTTC
CGCCAGGACG ACCTGTTCGA CGACCGCGTC GTATGCCTGA TGCGCGCGAC GCACCCGCTC
GCGCGGCGCG ACGCGATGAC GGCCGCCAGG TTCGCGGCGG CGCCGCAGCT GTGCCCGACG
CCGTCGTGGC TCGAAGCGTC CGGCGCGATC GACCGGCAAC TCGAACGCGT GGGTCTGCAA
CGGCGCATCG TCGTCACGCT GCCGCACTTC GAGCTCGCCG CGCATGCGCT GGTGCGCACC
GACCTGATCC TCACCACCAC GTACCGGCTC GCGCGGCACT ATGCGAAGCT GCTGCCGCTC
GCCGCAGTCG CGCTGCCGGT CGAGCCGCCG GACATCGCGT ACCGGATAAC GTGGAACGAA
TCGGGATCGT GCGCGGAAGG CGGTCGGTGG CTGCGCGGAC TGATCGCCGA GGCGACGCGC
GCATGGCTCG ACGCCGAGGC AAGGTTGCCG GCGGTCGCGG CGGTCGCTGC CGTTGCCGCT
TCCGGGGCCG ATGCGGACGC AACGAACACC GCGGTGCTGG GCACCGATCC GCCCGAGCCC
ACCCGGCGCA CGCGCCGCAG ACCGGCCACC CATTGCCATG CGTCGCATCC GGCGCGCGTC
GCGCAGGCGG CACGCATCCA TCGCGGCGCG ACGAAATCGC ACTGA
|
|---|
| Protein sequence | MRAPLDPTAL PRGTFDAAGA LDVLDARLMR ILLVLLTERT VSRAAVRLNM SQPATSAALK
RLRTLLGDPL LVRSRYGMVP TEFGARLIEP LRNALRVIDF IRIQQPTFDA RTSVRTYRIG
CPDYLNVLFV PKLVALFRER APHAQLVFHP LGDGFDDERA LADGELDVVI DNRPVRRSRF
RQDDLFDDRV VCLMRATHPL ARRDAMTAAR FAAAPQLCPT PSWLEASGAI DRQLERVGLQ
RRIVVTLPHF ELAAHALVRT DLILTTTYRL ARHYAKLLPL AAVALPVEPP DIAYRITWNE
SGSCAEGGRW LRGLIAEATR AWLDAEARLP AVAAVAAVAA SGADADATNT AVLGTDPPEP
TRRTRRRPAT HCHASHPARV AQAARIHRGA TKSH
|
|---|
| |