| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_4026 |
|---|
| Symbol | |
|---|
| ID | 4453123 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008543 |
|---|
| Strand | - |
|---|
| Start bp | 917206 |
|---|
| End bp | 918192 |
|---|
| Gene Length | 987 bp |
|---|
| Protein Length | 328 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 639696084 |
|---|
| Product | nitrate/sulfonate/bicarbonate ABC transporter periplasmic ligand-binding protein |
|---|
| Protein accession | YP_837655 |
|---|
| Protein GI | 116692122 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.0124646 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCACT CTTCCGCCCC CGCGCGCCGC CGCGCGCTGC AGCGCCTTGC CGCGCTCGCC
GCCGCGCCGC TCGCCGGCGG CCTCGCACTG CCCGCCCGCG CGGCCGGCAC CGACCTGTCG
GGCGTCACGC TCGTCCTCGG CGACCAGGCC GGCGGCCTGC GGGCGCTGGC CGAAGCGGCG
CACGTGTTCG ACGGCGCGCC GTACCGGTTC CGCTGGGCCA ACTTCCAGGG CGCCGCGCCG
CTGTTCGAAG CGCAGCGCGC GGGCGCGATC GATCTCGCAC CGGCCGGCGA CCTGCCCGTG
CTGACGGCCG CGCTCGGCGA TCCGTCGTTG CGGATCGTCG CGACGCGCGT CGGCTCGCCG
GCGTCGCTCG GCATCGTCGT GCAGCCGGAC TCGCCGGTCC GCACGGTGGC CGACCTGAAA
GGACAAACCG TCGTCGTGTC GTCGGCGCGC GGCAGCATCT CGCAGTACCA GTTGTACGGC
GCGCTGCGCG AACACGGGCT CGCCCCGCGC GACGTCGACG TGCGCTTCGT GCTGCCGGTC
GACGCGTTCG CCGCATTCGA GGCGAAGCGG ATCGGCATCT GGGCCACGTT CGATCCGTAC
TACGGGCATG CGGTGCGACG CGGTGCGCGC ATCGTCCGCG ACGGCAGCGG CATCAATTCG
GGGCTTGCGT TCCTGACGTC GCCGGTCGAA ACGCTCGACG ATCGCGGCAA GCGCGCGGCG
CTCGCGGACG TGCTCGCGCG GCTCGCCCGC GCCGGTCAAT GGGCGCTCGC GCACCCGGCC
GACTACGCGA GCGTCTATGC GTCGCTCACG CGCCTGCCGC CCGACGCGGC CACCGACATC
GCGCGCCGGG CCGCGCTCGC GCAGCGCAGC CTCAGCGGCG CCGACATCGA CGTGCTGCAG
CGTGTCGCCG ATCGCGCGGC CGCGGATGCG ATCCTGCCGC GCCGCGTCGA CGTCGCGTCG
ATCGCCATCC GGAACGTGTC GGCCTGA
|
|---|
| Protein sequence | MTHSSAPARR RALQRLAALA AAPLAGGLAL PARAAGTDLS GVTLVLGDQA GGLRALAEAA
HVFDGAPYRF RWANFQGAAP LFEAQRAGAI DLAPAGDLPV LTAALGDPSL RIVATRVGSP
ASLGIVVQPD SPVRTVADLK GQTVVVSSAR GSISQYQLYG ALREHGLAPR DVDVRFVLPV
DAFAAFEAKR IGIWATFDPY YGHAVRRGAR IVRDGSGINS GLAFLTSPVE TLDDRGKRAA
LADVLARLAR AGQWALAHPA DYASVYASLT RLPPDAATDI ARRAALAQRS LSGADIDVLQ
RVADRAAADA ILPRRVDVAS IAIRNVSA
|
|---|
| |