Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_4012 |
Symbol | |
ID | 4453230 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008543 |
Strand | - |
Start bp | 902496 |
End bp | 903404 |
Gene Length | 909 bp |
Protein Length | 302 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639696070 |
Product | LysR family transcriptional regulator |
Protein accession | YP_837641 |
Protein GI | 116692108 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.408694 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGACTTGT TGGCGACGAT GCGCATCTAC GTGAGGGTCG TGGAGCGCGG CACGATGTCC GGCGCGGCGC GGGATCTCGA CATGGGCCAA CCGGCCGTCA GCGAGCGCAT CGAGAAGCTC GAAAAGCATC TCGGCACGCG GCTGCTGATG CGCAGTGCAC GCACCCTCGC GTGCACGGAG GAAGGCCGGA TTTTCTACGA ACGCAGCAAG GCGCTGCTCG AAGCGGCCGA GCTGGCCGTT GCGTCGGTGT CGAAGACGGC GCATGCGCTC GACGGCACGA TCCGGCTCGC GGCGCCGCAA TGTTTCGGCG AGGTCGTGCT GCCGGGCGTG CTGATGCAGA TCCGCACCGC GTATCCGAAG CTGCACATCG ACCTCGTGCT GAACGACGAT ATCGTCGATC CGGTCACCGA GGGCGTCGAC ATTTCGATCC GGGTCGGCCA GCTCGGCGAT GGCGGATTCG TCGCGTACGC ACTCGGCGCG GTTGGCCGCA TGCTCGTGGC CGCGCCGTCG TATCTCGAGC GGCACGGCCC GATCGATACG AAGGCCGATC TCGCGAACCA TCCGTTCATC CGCGTGAAAG GCGTGTTCGC GAACGAACAG GTGCCGCTGC GGCACGACGG CGGCGCAGTC GAATACGCAC GCATCCGCAC CGTCATGACC GCGAGCCACT GGCGCCCGAT GTTCGACACG ATCGCGGCGG GAGGCGGCAT CGGCGTGGTC CAGCACCCGG CTTGCGCCGA CGCGCTCGCG CACGGCCGGC TCGTGCGCCT GCTGCCGCAC TACGACGTCC CCGACTTCGC GCTCAACGTG CTGGTGCACG CGCAACGGCC GCTGCCGCCG CGCGTGCGTG CCGTCGTCGA TCTGCTGAAA AGCGAACTCC CGCCGCTGCT GACGCAAGGT CAGCGCTAG
|
Protein sequence | MDLLATMRIY VRVVERGTMS GAARDLDMGQ PAVSERIEKL EKHLGTRLLM RSARTLACTE EGRIFYERSK ALLEAAELAV ASVSKTAHAL DGTIRLAAPQ CFGEVVLPGV LMQIRTAYPK LHIDLVLNDD IVDPVTEGVD ISIRVGQLGD GGFVAYALGA VGRMLVAAPS YLERHGPIDT KADLANHPFI RVKGVFANEQ VPLRHDGGAV EYARIRTVMT ASHWRPMFDT IAAGGGIGVV QHPACADALA HGRLVRLLPH YDVPDFALNV LVHAQRPLPP RVRAVVDLLK SELPPLLTQG QR
|
| |