Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_3984 |
Symbol | |
ID | 4452609 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008543 |
Strand | + |
Start bp | 871234 |
End bp | 873702 |
Gene Length | 2469 bp |
Protein Length | 822 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639696042 |
Product | formate dehydrogenase, alpha subunit |
Protein accession | YP_837613 |
Protein GI | 116692080 |
COG category | [C] Energy production and conversion |
COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
TIGRFAM ID | [TIGR01553] formate dehydrogenase, alpha subunit, proteobacterial-type |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCAGGTC TTGCCCCGAC GTTTGGCCGT GGAGCGATGA CGAACCATTG GGTCGACATC AAGAACGCGG ACGTGATTCT CGTGATGGGC GGCAATGCAG CCGAGGCCCA TCCGTGCGGT TTCAAGTGGG TAACGGAGGC GAAGGCGCAC CGCAAGGCGC GGCTGATTGT CGTCGACCCG CGCTTCACGC GTACGGCCTC GGTGGCCGAT TATTACGCGC CGATCCGCAC CGGCACCGAC ATCGTCTTCC TGGGCGGCGT CATCAACTAT CTGCTGACGA ACGACAAGAT CCAGCATGAG TACGTGAAGA ACTACACGGA CTTCTCGTTC ATCGTGCGCG AGGATTTCGC GTTCAACGAC GGCATCTATT CCGGCTACGA CGCCGAGAAG CACGCGTACC CGGACAAATC GAGCTGGGAC TACGAGCGCG GCGACGACGG CTTCGCGAAG GTCGATCCGA CACTGCAGCA TCCGCGTTGT GTATACAACC TGCTGAAGCA GCACTACGCG CGCTATACGG CGGAGATGGT CCAGCAGGTC TGCGGCACGC CGAAGGAGAA ATTCCTGAAG GTGTGCGAGA TGCTCGCGAC CACGGCCGTG CCCGGCCGCG CCGGCACGGT GCTGTACGCG CTCGGCTGGA CCCACCACTC GATCGGCGCG CAGATCATCC GCACCGGCGC GATGGTGCAG TTGCTGCTCG GCAACATCGG CATCGCCGGC GGCGGGATGA ACGCGCTGCG CGGCCACTCG AACATCCAGG GGCTGACCGA CCTCGGGCTG ATGTCGAACC TGCTGCCGGG CTACATGACG CTGCCGATGC AGGCCGAGCA GGATTTCGAC GCGTACATCA AGAAGCGCGT GCAGGAACCG CTGCGGCCGA ACCAGCTCAG TTACTGGAAG AACTACAAGG CGTTCCACGT CAGCTTCATG AAGTCGTGGT GGGGCGACGC GGCCACCGCG GAGAACAACT GGGCCTACGA CTACCTGCCG AAGCTGGACA AGCAGTACGA CCTGCTGCAG GCGATCGAGC TGATGAATGC CGGCAAGATG AACGGCTACA TCTGCCAGGG CTTCAACCCG CTCGCGGCGG CGCCGTCGAA GGTGAAGACG GCGGCGGGTC TCGCGAAACT GAAATGGCTC GTGATCATGG ATCCGCTCGC GACCGAGACG TCCGAGTTCT GGAAGCACCA CGGTGACTAC AACGACGTCG ATGCGTCGAA GATCCAGACC GAGGTGTTCC GTCTGCCGAC CACCTGCTTC GCGGAGGAAA ACGGCTCGCT CGTGAGTTCG AGCCGCGTGC TGCAGTGGCA CTGGAAGGGC GCCGAGCCGC CGGGCGAAGC GAGGAGCGAC CTCGAGATCA TGTCGGGGCT GTTCCTGCGC ATGCGCAAGC TGTACCAGAA GGACGGCGGC AAGTATCCGG ACCCGATCGT GAACCTGACC TGGCCGTACG CGAACCCGGA GAGCCCGACG CCCGAGGAAC TGGCGATGGA GTTCAACGGG AAAGCGCTCG CCGATCTGCC CGATCCGAAG GACCCGGCGA AGACGCTCGT GAAGAAGGGC GAGCAGCTCG CCGCGTTCGC GCAACTGAAG GACGACGGCA CGACCGCGAG CGGCTGCTGG ATCTTCTGCG GCGCGTGGAC CCAGGCCGGC AACCAGATGG GGCGGCGCGA CAACTCCGAC CCGACCGGCA TCGGCCAGAC GCTGAACTGG GCGTGGGCGT GGCCGGCGAA CCGGCGCATC CTGTACAACC GCGCGTCGTG CGACGTCGCG GGCAAGCCGT TCGACCCGAC CCGCAAGCTG ATCGGCTGGA ACGGCAGCGC GTGGAAGGGC GCCGACGTGC CGGACTTCAA GGCGGACGAA CCGCCCGAAA ACGGGATGGG GCCGTTCATC ATGAATCCGG AAGGCGTCGC GCGCTTCTTC GCCCGCGCGG GGATGAACGA AGGTCCGTTC CCCGAGCACT ACGAGCCGTT CGAGACGCCG CTCGGCGCGA ACCCGTTGCA CCCGAACAAC CCGCTGGCGC TGAACAACCC GGCCGCCCGC GTGTTCCCGG ACGACCGCGC GTCGTTCGGC AAGGTGGCGG ACTTCCCGCA CGTGGCGACC ACGTACCGGC TGACCGAGCA CTTCCACTAC TGGACCAAGC ATGCGCGGCT GAACGCGATC ATCCAGCCCG AGCAATTCGT CGAGATCGGC GAAGACCTCG CGAAGGAAGT CGGCGTCGCG CATGGCGAGC GCGTGAAGGT GTCGTCCAAG CGCGGCTACA TCATCGCGGT CGCCCTCGTG ACGAAGCGGA TCAAGCCGCT GACGATCGAC GGCAAGAAGG TCCAGACGGT CGGCGTCCCG TTGCACTGGG GCTTCAAGGG TCTGACGAAG CCCGGCTATC TCGCCAATAC CCTGACTCCG TCCGTGGGTG ACGGCAACTC CTATACACCG GAATTCAAGT CGTTCCTGGT GAAGGTCGAA AAGGCGTAA
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Protein sequence | MAGLAPTFGR GAMTNHWVDI KNADVILVMG GNAAEAHPCG FKWVTEAKAH RKARLIVVDP RFTRTASVAD YYAPIRTGTD IVFLGGVINY LLTNDKIQHE YVKNYTDFSF IVREDFAFND GIYSGYDAEK HAYPDKSSWD YERGDDGFAK VDPTLQHPRC VYNLLKQHYA RYTAEMVQQV CGTPKEKFLK VCEMLATTAV PGRAGTVLYA LGWTHHSIGA QIIRTGAMVQ LLLGNIGIAG GGMNALRGHS NIQGLTDLGL MSNLLPGYMT LPMQAEQDFD AYIKKRVQEP LRPNQLSYWK NYKAFHVSFM KSWWGDAATA ENNWAYDYLP KLDKQYDLLQ AIELMNAGKM NGYICQGFNP LAAAPSKVKT AAGLAKLKWL VIMDPLATET SEFWKHHGDY NDVDASKIQT EVFRLPTTCF AEENGSLVSS SRVLQWHWKG AEPPGEARSD LEIMSGLFLR MRKLYQKDGG KYPDPIVNLT WPYANPESPT PEELAMEFNG KALADLPDPK DPAKTLVKKG EQLAAFAQLK DDGTTASGCW IFCGAWTQAG NQMGRRDNSD PTGIGQTLNW AWAWPANRRI LYNRASCDVA GKPFDPTRKL IGWNGSAWKG ADVPDFKADE PPENGMGPFI MNPEGVARFF ARAGMNEGPF PEHYEPFETP LGANPLHPNN PLALNNPAAR VFPDDRASFG KVADFPHVAT TYRLTEHFHY WTKHARLNAI IQPEQFVEIG EDLAKEVGVA HGERVKVSSK RGYIIAVALV TKRIKPLTID GKKVQTVGVP LHWGFKGLTK PGYLANTLTP SVGDGNSYTP EFKSFLVKVE KA
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