Gene Bcen2424_3974 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_3974 
Symbol 
ID4452599 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008543 
Strand
Start bp858090 
End bp860555 
Gene Length2466 bp 
Protein Length821 aa 
Translation table11 
GC content70% 
IMG OID639696033 
Productglycosyl transferase, group 1 
Protein accessionYP_837604 
Protein GI116692071 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCGCG ATCTGGCGGA ACACGCCGTC CTGAATCTCG CCGCGGCCGA TGCCGCCGTT 
GCCCACCCGG GCGACGCCGC GCTGCACCGC GCGGTGCCGG CCGAGCGCGC GGGCGCGCGG
CAGCCGGCGC GTGCGCTGCG CGTGGCGATC GTCCACGACT GGCTCGTCAC CTATGCGGGC
GCCGAGCGCG TGCTCGAACA GATCGTCGCG TGCTTTCCCG ACGCGGACCT GTTCAGCCTC
GTCGATTTTC TCGACGACCG CGCATTCGTG CGCGGCAAGC CGGTGAGGAC GTCGTTCATC
CAGAAGCTGC CGTTCGCCCG CACCAAGTAC CGCAGCTACC TGCCGCTGAT GCCGCTCGCG
ATCGAGCAGC TCGACGTGTC CGAGTACGAC CTCGTGATCT CGAGCAGCCA CGCGGTCGCG
AAGGGCGTGC TGACCGGGCC GGATCAGGTG CACATCAGCT ACGTGCATTC GCCGATCCGC
TATGCGTGGG ACCTGCAGCA CCAGTATCTG GAACAGTCGA ACCTCACGCA CGGGCCGAAA
TCGCTGCTCG CGCGGATGAT CCTGCACTAC ATCCGCAACT GGGACACGCG CACCGCGAAC
GCGGTGGACG GCTTCGTCGC GAACTCCGCG TTCATCGCAC GGCGCATCAA GAAGGTCTAT
CACCGCGACG CGGCGGTGAT CTTTCCGCCG GTCGACGTCG ACGCGTTCTC GCTGAACGCG
GTGAAAGAGG ATTTCTACCT GACCGCGTCG CGGATGGTGC CGTACAAGAA GATCGACCTG
ATCGTCGAGG CGTTTTCGCG CACGCCCGAG CGCAAGCTCG TCGTGATCGG CGACGGCCCC
GAGATGCAGA AGATTCGCGC GAAGGCCGGC CCGAACGTCG AGATCATGGG CTACCAGCCG
TTCGCGGTGC TGCACGACCG GATGCGGCGC GCGAAGGCGT TCGTGTTCGC GGCCGAGGAG
GATTTCGGGA TCTCGGTCGT CGAGGCGCAG GCGTGTGGCA CGCCGGTCAT CGCGTACGGC
AAGGGCGGTG CGCTCGAAAC CGTGCTCGAC CCGCAATCGA ACCTGCACCC GACCGGCCTC
TTCTTCGACG AACAGACGCC GCACGCGATC GTCGCGGCCG TCGACGATTT CGAGCGTGCG
CCGCAGCGCT TCACGCCTGA CGCGTGCCGC GCGAACGCGG AGCGCTTTTC CGCCGACACG
TTCCGGCGGC GCTTTCTCGA CTACGTGGAG CAGGCGCTGC CCGGTTCGAC CGCGCAGCGC
GGCACGGCTG CCCCGCTGCC GGCCGCGCGC GGCCCGGCGA CGCTCGTGCT CGACCAGAGC
GGCGTGCTCG GCGGCGCCGA GCTGTCGCTG CTCGAGATCA TGAAACACAT GCGCGCGAAC
GCCGACGTGC TGCTGTTCGC CGACGGTCCG TTCCGCGCGG CGCTCGACGA GATCGGTGCG
CGCGTCGACG TGGTCGAGCA GGGTGCGCTC GCGGGCGTGC GCAAGCAGGG CGGCGTGTCG
TTCGGCGCGG TGAAGCAGCT CGTGCGGCTG GTGCGCGACG TCGCCCGGCG CGCGCGCCGC
GCCGAGGTGA TCTACGCGAA CACCCAACGC GCGATGGTGG TCGCCGCGCT CGCCGGGCGG
CTCGCGCGCA AGCCGGTGGT CTGGCACCTG CGCGACATCG TCAGCACCGA TCATTTCGGC
GGCAAGCAGT TGAAGGCGAT CAAGTATTGC GCGCGGCTCG GCGTCACGCG CGTGATCGCG
AACTCCGACG CTTCCGCGCA GGCGTTCCGC GCGCTGACGG GCTTCACGCC GCAGCACGTC
GACGTCGTGT TCAACGGCAT TTCGGCCGAA CCGTTCGACG CGCTGGAAGG CGTGAGCCAG
GCCGCGCTGC GCGCGCGCCT CGGGCTGCCA GCGGACGCCT GGCTGGTCGG CTCGTTCAGC
CGTCTCGCAC GCTGGAAGGG GCAGCACGTG CTGCTGGAGG CCGCCGCGCG GCACCCGGAC
ATGCATGTGG TGCTGGTCGG CGCGCCGCTG TTCGGCGAGG ACGACTATGC GGCGCAACTG
CACGAATTCG TCGCGCAGCA CGGGATGGAC GAACGCGTGC ATTTCCTCGG GTTCCAGCGC
GACGTGGCCG CGTGCATGAC GGCGGTCGAC GTTGTCGCGC ACACGTCGAT CACGCCGGAG
CCGTTCGGGC GCGTGATCGT CGAGGGGATG CTCGCGCGCC GGCCGGTCGT CGCGGCGCGG
GCGGGCGGCG TCGTCGAGAT CATCGAGGAC GGCGACAACG GGCTGCTTTG CGAGCCGGGC
AACGCGGCCG CGCTGGCCGA TGCGCTGGCG ACGCTCAAGC GTGACCGCGC GCTGCGCGAG
CGGCTCGTCG CGAGCGGGCG TGCGACCGCG GTGCGCCGGT TCGGGACCGA AACCTACGTG
GAGCGGGTCG AGAAGATCCT CGCGGATACG GCGAAAGCCG CCAAGGCCGC GAACGCGAAG
AAGTAG
 
Protein sequence
MNRDLAEHAV LNLAAADAAV AHPGDAALHR AVPAERAGAR QPARALRVAI VHDWLVTYAG 
AERVLEQIVA CFPDADLFSL VDFLDDRAFV RGKPVRTSFI QKLPFARTKY RSYLPLMPLA
IEQLDVSEYD LVISSSHAVA KGVLTGPDQV HISYVHSPIR YAWDLQHQYL EQSNLTHGPK
SLLARMILHY IRNWDTRTAN AVDGFVANSA FIARRIKKVY HRDAAVIFPP VDVDAFSLNA
VKEDFYLTAS RMVPYKKIDL IVEAFSRTPE RKLVVIGDGP EMQKIRAKAG PNVEIMGYQP
FAVLHDRMRR AKAFVFAAEE DFGISVVEAQ ACGTPVIAYG KGGALETVLD PQSNLHPTGL
FFDEQTPHAI VAAVDDFERA PQRFTPDACR ANAERFSADT FRRRFLDYVE QALPGSTAQR
GTAAPLPAAR GPATLVLDQS GVLGGAELSL LEIMKHMRAN ADVLLFADGP FRAALDEIGA
RVDVVEQGAL AGVRKQGGVS FGAVKQLVRL VRDVARRARR AEVIYANTQR AMVVAALAGR
LARKPVVWHL RDIVSTDHFG GKQLKAIKYC ARLGVTRVIA NSDASAQAFR ALTGFTPQHV
DVVFNGISAE PFDALEGVSQ AALRARLGLP ADAWLVGSFS RLARWKGQHV LLEAAARHPD
MHVVLVGAPL FGEDDYAAQL HEFVAQHGMD ERVHFLGFQR DVAACMTAVD VVAHTSITPE
PFGRVIVEGM LARRPVVAAR AGGVVEIIED GDNGLLCEPG NAAALADALA TLKRDRALRE
RLVASGRATA VRRFGTETYV ERVEKILADT AKAAKAANAK K