Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_3952 |
Symbol | |
ID | 4452071 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008543 |
Strand | + |
Start bp | 830819 |
End bp | 831886 |
Gene Length | 1068 bp |
Protein Length | 355 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639696011 |
Product | 3-isopropylmalate dehydrogenase |
Protein accession | YP_837582 |
Protein GI | 116692049 |
COG category | [C] Energy production and conversion [E] Amino acid transport and metabolism |
COG ID | [COG0473] Isocitrate/isopropylmalate dehydrogenase |
TIGRFAM ID | [TIGR00169] 3-isopropylmalate dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.201991 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGATTG CAGTGCTGCC CGGCGACGGC ATCGGTCCGG AAATCGTCAA TGAAGCGGTG AAGGTGCTGA ACGCACTCGA CGAGAAGTTC GAACTCGAAC AGGCGCCGGT CGGCGGCGCG GGCTACGAGG CGAGCGGCCA TCCGCTGCCC GACGCGACGC TGGCGCTCGC GAAGCAGGCC GACGCGATCC TGTTCGGCGC GGTCGGCGAC TGGAAGTACG ACTCGCTGGA GCGCGCGCTG CGCCCCGAGC AGGCGATTCT CGGGCTGCGC AAGCACCTCG AGCTGTTCGC GAACTTCCGC CCGGCGATCT GCTATCCGCA GCTCGTCGAT GCGTCGCCGT TGAAGCCGGA GCTCGTCGCG GGCCTCGACA TCCTGATCGT GCGCGAACTG AACGGCGACA TCTACTTCGG CCAGCCGCGC GGCGTGCGCG CGGCGCCGGA CGGCCCGTTC GCCGGCGAGC GCGAAGGCTT CGACACGATG CGCTATTCGG AGCCGGAAGT GCGCCGCATC GCGCACGTCG CGTTCCAGGC CGCGCAAAAG CGCGCGAAGA AGCTGCTGTC GGTGGACAAG TCGAACGTGC TGGAAACGTC GCAGTTCTGG CGCGACATCA TGATCGACGT GTCGAAGGAA TACGCGGACG TCGAGCTGTC GCACATGTAC GTCGACAACG CGGCGATGCA GCTCGCGAAG GCGCCGAAGC AGTTCGACGT GATCGTCACG GGCAACATGT TCGGCGACAT CCTGTCGGAT GAAGCGTCGA TGCTGACGGG TTCGATCGGC ATGCTGCCGT CGGCGTCGCT CGACAAGCAC AACAAGGGGC TGTACGAGCC GTCGCACGGT TCGGCGCCGG ACATCGCGGG CAAGGGCATC GCGAACCCGC TCGCGACGAT CCTGTCGGCC GCGATGCTGC TGCGCTACTC GCTGAATCGC GCGGAGCAGG CCGATCGCAT CGAGCGCGCG GTGAAAACGG TGCTCGAACA GGGTTATCGC ACGGGCGACA TCGCGACGCC GGGCTGCAAG CAGGTCGGCA CGGCGGCGAT GGGCGACGCG GTGGTCGCCG CGCTGTAA
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Protein sequence | MKIAVLPGDG IGPEIVNEAV KVLNALDEKF ELEQAPVGGA GYEASGHPLP DATLALAKQA DAILFGAVGD WKYDSLERAL RPEQAILGLR KHLELFANFR PAICYPQLVD ASPLKPELVA GLDILIVREL NGDIYFGQPR GVRAAPDGPF AGEREGFDTM RYSEPEVRRI AHVAFQAAQK RAKKLLSVDK SNVLETSQFW RDIMIDVSKE YADVELSHMY VDNAAMQLAK APKQFDVIVT GNMFGDILSD EASMLTGSIG MLPSASLDKH NKGLYEPSHG SAPDIAGKGI ANPLATILSA AMLLRYSLNR AEQADRIERA VKTVLEQGYR TGDIATPGCK QVGTAAMGDA VVAAL
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