Gene Bcen2424_3905 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_3905 
Symbol 
ID4452258 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008543 
Strand
Start bp782239 
End bp783327 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content70% 
IMG OID639695964 
ProductNAD-dependent deacetylase 
Protein accessionYP_837535 
Protein GI116692002 
COG category[K] Transcription 
COG ID[COG0846] NAD-dependent protein deacetylases, SIR2 family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCAAT TGTTGAAGCG CCCGTCGCCG AGCGGCGACG GGCGTCTTTT TGCGTGCGAC 
GGCTCGTCGT GGCGGCGGCC CGCCCGATCG CACGGCGTTC TGTATCATGT GCTGGCGTGC
CTGGCTGCCC GTGCGGGCGC ACGGCCTGCC GGCGCGACCG ATCACGTTGC CAACATGAAC
GACAAAGCCT TGCCCGATTC CTCCCTCGCC GACGCCGATC CGGCCGCGCT CGATGCGCTG
CAGACCTTCG TCGAGCGTCA TCCGCGCCTG CTCGTGCTGA CCGGCGCGGG CATCAGCACC
GATTCCGGCA TTCCCGGTTA TCGCGACCGC AACGGCCAAT GGATGCGCTC GCCGCCGATC
CAACTCCAGG AATTCCTCGG TTCCGATGCC GCGCGGCGCC GCTACTGGGC GCGCAGCATG
ATCGGCTGGC CGGTCGTCGG CCGCGCGCGG CCGAACGGGT CGCATGTCGC GCTGGCGCGG
CTCGGCGACG CAGGGCGAAT CGAGCGCCTC GTCACGCAGA ACGTCGACGG CCTGCATCAG
CGCGCGGGCA GCGACGACGT GATCGAACTG CACGGCGGCA TCAACGGCGT GACCTGCCTC
GAATGCGGCG CGCATCACGC GCGAGCGACG ATTCAGACCG TGCTCGAAGC CGACAATCCC
GAACTGCTGG GCGCGCAGGC CGAGCCCGCC GCGGACGGCG ACGCGCATCT GGAATGGGCC
GCGCTCGATA CGTTCCGCGT TCCGGCGTGC CCCGCGTGCG GCGGCTTGCT GAAGCCTGCG
GTGGTGTTCT TCGGCGAGAA CGTGCCGCGC GAGCGCGTGG CGCTGGCGTC GCAGGCGCTC
GATGCGGCCG ACGCGCTGCT CGTCGTCGGC TCGTCGCTGA TGGTGTATTC CGGCTACCGC
TTCTGCGTGT GGGCGCAGGC GCAGCACAAG CCGGTTGCCG CACTCAATCT CGGCCATACG
CGCGCCGACC CGATGCTGAC GCTGAAGGTC GAGGCGCACT GCGCGCCCGC GCTCGACGCA
CTCGTGGCGC GGCTGGGGCT CGGGCGCAAC AGCGCCAGCA CCAGCGACAC GACGGAGCAT
GCATCGTGA
 
Protein sequence
MDQLLKRPSP SGDGRLFACD GSSWRRPARS HGVLYHVLAC LAARAGARPA GATDHVANMN 
DKALPDSSLA DADPAALDAL QTFVERHPRL LVLTGAGIST DSGIPGYRDR NGQWMRSPPI
QLQEFLGSDA ARRRYWARSM IGWPVVGRAR PNGSHVALAR LGDAGRIERL VTQNVDGLHQ
RAGSDDVIEL HGGINGVTCL ECGAHHARAT IQTVLEADNP ELLGAQAEPA ADGDAHLEWA
ALDTFRVPAC PACGGLLKPA VVFFGENVPR ERVALASQAL DAADALLVVG SSLMVYSGYR
FCVWAQAQHK PVAALNLGHT RADPMLTLKV EAHCAPALDA LVARLGLGRN SASTSDTTEH
AS