| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_3901 |
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| Symbol | |
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| ID | 4452254 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia HI2424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008543 |
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| Strand | - |
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| Start bp | 775416 |
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| End bp | 776540 |
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| Gene Length | 1125 bp |
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| Protein Length | 374 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639695960 |
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| Product | secretion protein HlyD family protein |
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| Protein accession | YP_837531 |
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| Protein GI | 116691998 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGACGC CACAAGACCC GCCACAGAAA GCAGATCGTC AGGAAAACAA AACAACGCCG
CGCAACGGCA ACGGCGGAAC GAGGCGGCGC ATCCTGCTCG TGGTCGCCGT GCTCGCGGCC
GTCGGCGGCG CGGTCTGGCT CGGCCGCTGG TGGACGGTCG GCCGCTTCAT CGAAAGCACC
AACGACGCGT ACCTGCAGGC GGACAGCATG ACCGCCGCAC CGAAGGTCGC CGGCTACGTG
ACCGACGTCT ACGTGCGCGA CAACCAGCCC GTGAAGGCCG GCGATCCGCT CGTGCGGCTC
GATGTCCGCC AGTACCAGGT GGCGCTCGCG CAAGCGCAGG CGACCGTCGA CGCCCGCCGC
GCCGATATCG CGCGCGCCGA AGCCGACATC AGCCAGCAGC GCGCGAATCT CGAGCAGGCC
GACGCGCAGG CGAAGGTGTC GCGCATCAAC GCGCAGCACG CAAGCGACGA GTACACGCGC
TATGCGCCGC TCGCGGCGAC CGGCGCCGAA ACGCACGAAC GCGTGGCCGA TCTGAAAAGC
ACGCGCGACC AGGCGGCGGC GACACTCGCC GCGAACAACG CGTCGATCGC CGCCGCACGC
ACGCAGATCG CGTCGTTCAC CGCGCAGCTC CAGCAGGCGC GCGCGCAGCT CGAGGCCGCG
CAGGCCAGCG CCGCGCAGGC GCAGCTCGAC CTCGACAATA CGATCGTGCG CAGCACGCTC
GCGGGCCGCG TCGGCGATCG CACGGTGCGC GTCGGGCAAT ACGTGCAGCC CGGCACGCGC
CTGCTGACCG TCGTGCCGGT CGATTCGATC TACCTCGTCG CGAACTTCAA GGAAACGCAG
ATCGGCAACA TGCGCATCGG CCAGCCCGTC GAGCTGCACG TCGATGCGCT GCCGGACGGC
CCGCTGTCCG GCGTCGTCGA CAGCTTCGCG CCCGGCACCG GCGCGCAGTT CGCGCTGCTG
CCGCCCGAGA ACGCGACCGG CAACTTCACG AAGATCGTCC AGCGCGTGCC GGTGCGCATC
CGTCTCGCCG CGAACGCCCG CGCGCAACGC ATGCTGCTGC CCGGGCTGTC GGTGACGGTC
GACGTCGATA CGCGCTCGGC CCGCGACGAG CAGCATCATG GCTGA
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| Protein sequence | MSTPQDPPQK ADRQENKTTP RNGNGGTRRR ILLVVAVLAA VGGAVWLGRW WTVGRFIEST
NDAYLQADSM TAAPKVAGYV TDVYVRDNQP VKAGDPLVRL DVRQYQVALA QAQATVDARR
ADIARAEADI SQQRANLEQA DAQAKVSRIN AQHASDEYTR YAPLAATGAE THERVADLKS
TRDQAAATLA ANNASIAAAR TQIASFTAQL QQARAQLEAA QASAAQAQLD LDNTIVRSTL
AGRVGDRTVR VGQYVQPGTR LLTVVPVDSI YLVANFKETQ IGNMRIGQPV ELHVDALPDG
PLSGVVDSFA PGTGAQFALL PPENATGNFT KIVQRVPVRI RLAANARAQR MLLPGLSVTV
DVDTRSARDE QHHG
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