| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_3900 |
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| Symbol | |
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| ID | 4452253 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia HI2424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008543 |
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| Strand | - |
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| Start bp | 773837 |
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| End bp | 775423 |
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| Gene Length | 1587 bp |
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| Protein Length | 528 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639695959 |
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| Product | EmrB/QacA family drug resistance transporter |
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| Protein accession | YP_837530 |
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| Protein GI | 116691997 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.645893 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGATA CGCCCGCCAC GATCCCCCTG CCGCCGCATG AAGGCCGCGC GAGCGTGACC
GACTGGATCG CGGTCGCGGC CGGCGCGCTC GGCGCGCTGA TGGCAACGCT CGACATCTCG
ATCACGAATT CTGCGCTGCC GCAGATCCAG GGCGAAATCG GCGCGACCGG CACCGAAGGC
ACGTGGATCT CGACCGGCTA CCTGATGTCG GAAATCGTGA TGATCCCGCT CGCCGCCTGG
CTCACGCGCG TGTTCGGGCT GCGCAATTTC CTGCTGACGA ACTCCGCGCT GTTCATCGCA
TTCTCGATGA TGTGCGGCTG GTCGCATTCG CTGCCGATGA TGATCGCGGG CCGGATCGGC
CAGGGCTTCA CCGGCGGCGC GCTGATTCCG ACCGCGCAGA CGATCATCCG CACGCGATTG
CCGCTGTCGC AGTTGCCGGT CGGGATGACG CTGTTCGGCC TGATCGTGCT GCTCGGGCCG
CTGTTCGGCC CCGTGCTCGG CGGCTGGCTC GCGGAAAACG TGAACTGGAG CTGGTGCTTC
TTCCTGAACC TGCCGGTGTG CCTGCTGCTG ATGGCCCTGC TGGTGTTCGG CCTGCCGTCG
GACCGCCCGC AATGGAGCGC ATTCTTCAAC GCGGACTGGC TCGGCATCCT CGGCCTCGCG
ATCGGCCTCA GCTCGCTGAC CGTCGTGCTC GAGGAAGGCC AGCGCGAACG CTGGTTCGAA
TCGCAGATGA TCGTCACGCT GAGCATCGTG TCGTTCATCG GGATGGTCCT GATCGCGCTG
TCGCAGCGCT TCGCGAAGCG GCCGATCATG CGGCTGTCGC TGATGCGCAA CCCGCGCTAC
GCGAGCGTCA TCGTGATCGT GTCCGCGGTC GGCGCCGGGC TGTACGGCGT GTCTTACCTG
CTGCCGCAGT TCCTCGCGAT CGTCGCCGGC TACAACGCGG AACAGGCTGG CGCGATCATG
CTGCTGTCGG GGTTGCCGGC CTTTCTCGTG ATGCCGATCC TGCCGCGCCT GCTCGGCAAG
GTCGATTTCC GCATCCTCGT GATCACGGGG CTGCTGCTGT TCTGCCTGAG CTGCATGCTC
GACATCAGCC TGACCGCACA GAGCGTGGGC CACGATTTCG TATGGTCGCA ACTGATCCGC
GGCCTCGCGC AGATGCTCGC GATGATGCCG CTCAACCAGG CGTCGATGGC GGCCGTCGCG
CGCGAAGACT CGGGCGATGC GGCCGGGCTC TACAACATGG CGCGCAACCT CGGCGGCTCG
ATCGGGCTCG CGATCATCGG CACCGTGATC GACCGGCGCA CGACTTTCCA TACGGCCGCG
CTGCGTGAAT CGGTGACCGC GAACTCGCTG ATCGGGCAGG ATCGCCTGTC GGCCTATGCG
GCCAACTGGT TCGCGCACAC CGGCGATCTC GCGTATTCGA ACCTGCGCGC CCTCGGTCAG
CTGGCGCAGC AGATCCAGAT CCAGGCCGTC GTGATGACCT ATTCCGAAAC CTTCTATCTG
CTGGGCCTCG CGCTGCTCGC CTGCGTGCCG CTCGCGCTGC TGCTGAGAAC GCCGCGCGGG
CCGCAACCGA TGTCGTCCGG CCATTGA
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| Protein sequence | MADTPATIPL PPHEGRASVT DWIAVAAGAL GALMATLDIS ITNSALPQIQ GEIGATGTEG
TWISTGYLMS EIVMIPLAAW LTRVFGLRNF LLTNSALFIA FSMMCGWSHS LPMMIAGRIG
QGFTGGALIP TAQTIIRTRL PLSQLPVGMT LFGLIVLLGP LFGPVLGGWL AENVNWSWCF
FLNLPVCLLL MALLVFGLPS DRPQWSAFFN ADWLGILGLA IGLSSLTVVL EEGQRERWFE
SQMIVTLSIV SFIGMVLIAL SQRFAKRPIM RLSLMRNPRY ASVIVIVSAV GAGLYGVSYL
LPQFLAIVAG YNAEQAGAIM LLSGLPAFLV MPILPRLLGK VDFRILVITG LLLFCLSCML
DISLTAQSVG HDFVWSQLIR GLAQMLAMMP LNQASMAAVA REDSGDAAGL YNMARNLGGS
IGLAIIGTVI DRRTTFHTAA LRESVTANSL IGQDRLSAYA ANWFAHTGDL AYSNLRALGQ
LAQQIQIQAV VMTYSETFYL LGLALLACVP LALLLRTPRG PQPMSSGH
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