| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_3899 |
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| Symbol | |
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| ID | 4452252 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia HI2424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008543 |
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| Strand | - |
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| Start bp | 772336 |
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| End bp | 773823 |
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| Gene Length | 1488 bp |
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| Protein Length | 495 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639695958 |
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| Product | RND efflux system outer membrane lipoprotein |
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| Protein accession | YP_837529 |
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| Protein GI | 116691996 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.624231 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACCCT TCTCCCTGCC CCGCCGCCCC GCGCTCACCC TGTGTGCGGC CGCGTGCCTG
CTCGCCGGCT GCACGGTCGG CCCCGACTAC CACGGCGCGC CCGCCGCACC GGATGCATCG
ACCTTCGTGC GTGCGCCGGC CACTGGCGTC GACACCGCGT CGCCCGCACC GAGCGCGTGG
TGGCATGCAC TGAACGATCG CCAGCTCGAC GCGCTGATCG TCGCCGCGCT CGTGTACAAC
CCCGATCTGC ACGCCGCGCA GGCCCGCTTG CGCGCGGCAC GCGCACAGCT CTCGCAACAG
CGCGCCGCGC AGATGCCGAA ATCGTCGGCC ACCGTCGCGG CCATCCGCAT GCGCGAGCCG
GACGTCAGCG CGCTCGGCTC GCTGCTGCCG TCGAACGGCT CGGAGCAATC GGGCGGCACG
TCGCCGTCGC TCGGCGGCTC GGGGCCGCTG CAACTCTATT CGGCGGGCTT CGACGCGACG
TGGGAAATCG ACCTGTTCGG CGGCACGCGC CGCGCGGTCG AAGCCGCATC CGCCCAGGCC
GAAGCGGTCG ATGCCGATCT CGCCGACACG CAGGTGTCGA TCGCGGCCGA AGTCGCGAAT
GCGTATGTCG ACCTGCGCGA CCAGCAGCAA CGACTTGCGT TGTCGAAGCG CACCGCGCAA
CTGCAACAGC AGATGCTCGA ACTGACGCAG CAGCGCCGCG CGCGCGGCGT CGCGGCCGAT
GCCGACATCG AGCGACTGAC GACGCAGGTC GAGAACACGC GCGCGTCGCT GATCCCGCTC
GACGCCCAGG TGACCGAATC GCTCGACCGG CTCGCGATCC TGACGGGCCG CGCGCCGGGC
GCGCTCGACG CCGCGCTGTC GACCCCGGAC GCGGCATTGC CGACGCTGCC CGGCAGCGTC
GCGATCGGCG ATCCGGCCAC GCTGCTGAAA CAGCGCCCCG ATATTCGCGC GGCCGAACGC
CGGCTTGCGT CCAGCAATGC GCAGATCGGC GAGCATGTCG CCGACTATTT TCCGAAGGTG
ACGTTGCTCG GCGATCTCGG CTTCAGCGCG ACGGACCCGG GCCATCTGTT CCGCAAGCAG
AATTTCACGT GGGTCGGTGC GCCGTACCTG CAATGGAACA TTCTCGACTT CGGACGCACG
CGTGGCGCGG TACGCGCGGC AGAAGCATCG CGCGATGAAG CGGAGGCGAA TTATCAGAAG
GCCGTGCTCG GTGCATTACA GGATGCCAAC ACCGCGTTGC AGCGTTACGG GCATCAGCGC
GAGCACGTCG TCGCATTGAC GAAGGTGCAG ACGTCGGCCG TTCATTCGCG CGCGCTGATG
GACCAGCGCT ATCGCGCGGG CGTCGCGTCG ATGATCGACC TGCTCGATAC GCAACGTGAA
GCGTTCGCCG CGCAGCAGAA CGTGATCGCC GGGCAGGCCG AACTGATCAA GAACTACGTG
TCGGTGCAGA AGAGCCTCGG GCTCGGCTGG CAGACGAGCG CCGGTTGA
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| Protein sequence | MKPFSLPRRP ALTLCAAACL LAGCTVGPDY HGAPAAPDAS TFVRAPATGV DTASPAPSAW
WHALNDRQLD ALIVAALVYN PDLHAAQARL RAARAQLSQQ RAAQMPKSSA TVAAIRMREP
DVSALGSLLP SNGSEQSGGT SPSLGGSGPL QLYSAGFDAT WEIDLFGGTR RAVEAASAQA
EAVDADLADT QVSIAAEVAN AYVDLRDQQQ RLALSKRTAQ LQQQMLELTQ QRRARGVAAD
ADIERLTTQV ENTRASLIPL DAQVTESLDR LAILTGRAPG ALDAALSTPD AALPTLPGSV
AIGDPATLLK QRPDIRAAER RLASSNAQIG EHVADYFPKV TLLGDLGFSA TDPGHLFRKQ
NFTWVGAPYL QWNILDFGRT RGAVRAAEAS RDEAEANYQK AVLGALQDAN TALQRYGHQR
EHVVALTKVQ TSAVHSRALM DQRYRAGVAS MIDLLDTQRE AFAAQQNVIA GQAELIKNYV
SVQKSLGLGW QTSAG
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