Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_3896 |
Symbol | |
ID | 4452249 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008543 |
Strand | - |
Start bp | 768309 |
End bp | 769469 |
Gene Length | 1161 bp |
Protein Length | 386 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 639695955 |
Product | RND family efflux transporter MFP subunit |
Protein accession | YP_837526 |
Protein GI | 116691993 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0845] Membrane-fusion protein |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.51885 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGAATC AGAAACGATG CTGCCACGGT GCCGTATGCG CGCTGGTGGC GGCAATGCTG GCGGGGTGCG GACCGTCCGA GCAGCAGGCC GCCGCCCCGG CCACCCCGGT CGCGGCCATG ACGGTGGCCG CCACGCGCGT CGACGTGACC GAAGACCTGC CGGGCCGCGT CGCGGCCGTG CGGGTGGCCG AGATCCGGCC GCAGGTGAGC GGCATCGTGC AACGCCGGCT GTTCGAACAA GGCACCGAAG TGCGCGCCGG CCAGCCGCTG TTCCAGATCA ATCCGGCGCC GTTCAAGGCG GAGATGGACA CGGCTGCCGC CTCGCTGCAG CGTGCGCAGG CCGCGCTCGA GCGCGCGAAG GTGCAGACGG CGCGCTTCAA GCCGCTCGTC GAGGCCGACG CGATCAGCCG CCAGGTGTAC GACGACGCCG TATCGCAACG CGACCAGGCC GCGGCCGACG TCGCGCAGGC CCGCGCGACG CTCGCGCGCC GCCAGCTCGA CCTGAAGTTC GCGACCGTGG AAGCGCCGAT CGCCGGCCGC ATCGACCAGG CGCTCGTGAC CGAAGGCGCG CTGGTGTCGA GCAGCGACAG CCAGCCGATG GCGCGCATCC AGCAGATCGA CCAGGTCTAC GTGGACGTGC GGCAACCGGC CGCCTCGCTC GAGGCGCTGC GCGACGCGCT CGCGTCGCAG CCGCAAGCGT CGGACGGCAA CGGCCTGCCG GTCGACGTGC TGCGCGACGA CGACACGCGT TACGACGTGC GCGGCCGCAT GCTGTTCTCG GGCGTCAACG TCGATCCGGG CACCGGCGAC GTGCTGCTGC GCGTGCTGGT CGACAACCCG AAACGCCAGT TGCTGCCGGG CATGTACGTG CGTGCCCGGA TTCCGCGCGC GCACTACGCC AACGCCGTGA TGGTGCCGCA ACAGGCCATC GTGCGCGCCG GCGGCAAGCC GCAGGTGTGG GTGCTCGACG CGAAAGGTAC CGCTCGTCTG AAAGCGGTCG AGGTCGGCGA ACTGACGAAC CGCAGCTATC GGATCAAATC GGGCCTGCAG GCCGGTCAGA AGATCGTCGT CGAAGGCATG GAGCGCCTGA CCGACGGCGC ACCGGCTGCC GCAACCGACT GGAAGTCGCC TGACGCGGTC GCCACCGCGT CCGCGCACTG A
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Protein sequence | MKNQKRCCHG AVCALVAAML AGCGPSEQQA AAPATPVAAM TVAATRVDVT EDLPGRVAAV RVAEIRPQVS GIVQRRLFEQ GTEVRAGQPL FQINPAPFKA EMDTAAASLQ RAQAALERAK VQTARFKPLV EADAISRQVY DDAVSQRDQA AADVAQARAT LARRQLDLKF ATVEAPIAGR IDQALVTEGA LVSSSDSQPM ARIQQIDQVY VDVRQPAASL EALRDALASQ PQASDGNGLP VDVLRDDDTR YDVRGRMLFS GVNVDPGTGD VLLRVLVDNP KRQLLPGMYV RARIPRAHYA NAVMVPQQAI VRAGGKPQVW VLDAKGTARL KAVEVGELTN RSYRIKSGLQ AGQKIVVEGM ERLTDGAPAA ATDWKSPDAV ATASAH
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