| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_3858 |
|---|
| Symbol | |
|---|
| ID | 4452039 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008543 |
|---|
| Strand | - |
|---|
| Start bp | 721636 |
|---|
| End bp | 722337 |
|---|
| Gene Length | 702 bp |
|---|
| Protein Length | 233 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 639695916 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_837488 |
|---|
| Protein GI | 116691955 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1118] ABC-type sulfate/molybdate transport systems, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.447489 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCTCG TCGTCGACAT CCGCAAGACC TACGCGAGCG CCGAGCGCCG CTTCACGCTC
GACATGTCGT TCACGGCGAC GACGCAGCGC GTCGTGCTGT TCGGGCCGTC GGGCGCGGGC
AAGAGCATGA CGCTGCAGGC GATCGCGGGG CTGCTGACGC CCGACGCAGG CACGATCACG
CTGAACGGCG AGCCGCTGTT CGACGCCGCG CGCCGGATCG ACGTGCCGAC CCGCGAACGC
CGTGTCGCGT ACCTGTTCCA GGACTACGCG CTGTTCCCGC ATCTGAACGT GCGGCAGAAC
ATCGCGTTCG GGCTCACGTC CGGGCTGCGC AACCCGCGCG CGAAGACGGT GCCACCGGAG
GTCGCGTACT GGCTGCGCGC ATTCGACCTC GAATCGCTCG CGGGGCAATA TCCGTCGCAA
CTGTCGGGCG GGCAGAAGCA GCGCGTGGCA CTCGCTCGTG CGCTGGTCGC GCAGCCGCGC
ATCCTGCTGC TCGACGAACC CTTCGCGGCG CTCGACGGCG CGATGCGCCA GCGCATGCGC
CATGAGCTCG CCGAACTGCA GGCGCGGCTC GACATCCCGA TGGTGCTGAT CTCGCACGAC
CCAGACGACG TCGCCGCGTT CGGCGACCAG GTCGTGCAGT TGAGCGAAGG ACGCGTGCAG
GCGAGCCCGC CGCACGCCGA GTGGCCGACG CGCGTCACCT GA
|
|---|
| Protein sequence | MSLVVDIRKT YASAERRFTL DMSFTATTQR VVLFGPSGAG KSMTLQAIAG LLTPDAGTIT
LNGEPLFDAA RRIDVPTRER RVAYLFQDYA LFPHLNVRQN IAFGLTSGLR NPRAKTVPPE
VAYWLRAFDL ESLAGQYPSQ LSGGQKQRVA LARALVAQPR ILLLDEPFAA LDGAMRQRMR
HELAELQARL DIPMVLISHD PDDVAAFGDQ VVQLSEGRVQ ASPPHAEWPT RVT
|
|---|
| |