Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_3849 |
Symbol | |
ID | 4451805 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008543 |
Strand | + |
Start bp | 711906 |
End bp | 713558 |
Gene Length | 1653 bp |
Protein Length | 550 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 639695907 |
Product | glycoside hydrolase family 13 protein |
Protein accession | YP_837479 |
Protein GI | 116691946 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0296] 1,4-alpha-glucan branching enzyme |
TIGRFAM ID | [TIGR02402] malto-oligosyltrehalose trehalohydrolase |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.770452 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGATT GTCCGCATGA TCCGTACGCG CAGCACTACA TCCATTGTTT GCCGTTTGGC GCGCAGCCCT GCGGCGCGCT CAGCACGACG CCGCGCACGC ATTTCCGCGT GTGGGCGCCC GGCAGCACCC ACGTCCAGCT CGAACTGAAT ACCGGCTACG GCCCGATGCT GGTGCCGATG ACGAGCGCCG GCCCGAACTG GTTCGAAGTG TTCGTCGACT GCGGCGCGGG CGCACGTTAC CGCTATCGTC TCGACGATAC CGTGTCGATT CCCGATCCCG CGTCGCGTTC GCAACCCGAG GGGCTCAACG GGCCGAGCGA GGTCGTCGAT CCGCGCGCGT TCACGTGGCG CAATACGTTC TGGCACGGGC GCGCATGGGA GGACGTCGCG CTCTACGCGA TCCGCCCGCA CGCGGTGGGC GGCTTCGACG CCGTGCGCCG CCGCCTGCCG CAGCTCGCGC GCCTCGGTGT GACCGCGCTG GAGCTGCTCG CGTCGCCGCA CGACAGCCTG CCGTTCGCGC CGCTCGCGGC CGAAGGCGGC CCCGACGAGC TGAAGGCGCT GATCGACGCC GCGCACGGCT ACGGTCTCGC GGTGCTGCTG GAGCTCGACT ACGCGCGCTT CGGCAGCGGC ACCGACGCGC TGCGCCACTA TGCGGGGCCG TTCTTCCATA CGCGCGACGA TCCGCTGCAG GCCGCGCCGC TCGCGCTCGA TCATCCGGAA GTCTGCGATT TCTTCTGCGA CAACGCGCTG TACTGGATCG ATGAATACCG TTGCGACGGG CTGCGCCTGC GCGAAGCCGA CCGGATCGGC GTGTCGTGGC TGCGCGAGAT CGCGGATCGC GTGCGCGCCG CCGTGCCGGC CGACCGGCTG ATCCACCTCG TGCTCGGCAG CGAGCGGCAT CCGGCGCATC TGGCCGATAC CCATTTCGAC GCGCAGTGGA ACGGCTGCGG CGAACGTGCG CTGCACCGGC TCACGGGGCG TGACCCGTCG GCGCATGAAG GCATTTCCGC GCACCAGTCG ATCCACACGC TCGCCCGCGC GCTGACCGCG GCCGGCGCGG CGTACCAGCC GGCCGCGTCG TCTGACGGGA TGGGCGCCGA CGGTGGACTG TCGCTGACGT CGCTCGTGCT GTCCGATGGC GCATGGCGCG ACGGCGGCCC CGGCGATCCC GGGCAGGCGG CCGGTCTGGC CGCGCTCGCG CTGTCGCTGC TCACGCCGCA GATCCCGCTG ATCTTCGACG AGACTGCGCG CGACATCGAT CGCGCGCATT TCGTGCAGTC GGCGCTCGCG GTGCGCGCGA AGCTGATCGC GCCGCGGCTG TCCGATTGCC GGCCGCAGGC AGCCCATGCG CTGAAGGCGG ACGGCGACGG CGATGCCGAC GCGCTGTGCG CGTCATGGCG GCTCGCCGAC GACGAGACGT TGACGATCGC GTTGAACCTG TCGCCGGATG CGGTGCCGTT CGATGCACCG GGCGGGCGGG TGGTGTTCGA GACGCCGGCG CGCGCTCGCG ACCGGGTCGA TGAAGGGGAA TTGCCGCCGT ATTCGCTCGT CGCGTGGCTG ACCGGCGACG TCAATCGCTA CGCGCTGACG CACGACGTGC GTCGCCTCGA CGACGGTTCG TGGCGCGGCA TGCGTCCGAA CCTGAACGCA TGA
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Protein sequence | MSDCPHDPYA QHYIHCLPFG AQPCGALSTT PRTHFRVWAP GSTHVQLELN TGYGPMLVPM TSAGPNWFEV FVDCGAGARY RYRLDDTVSI PDPASRSQPE GLNGPSEVVD PRAFTWRNTF WHGRAWEDVA LYAIRPHAVG GFDAVRRRLP QLARLGVTAL ELLASPHDSL PFAPLAAEGG PDELKALIDA AHGYGLAVLL ELDYARFGSG TDALRHYAGP FFHTRDDPLQ AAPLALDHPE VCDFFCDNAL YWIDEYRCDG LRLREADRIG VSWLREIADR VRAAVPADRL IHLVLGSERH PAHLADTHFD AQWNGCGERA LHRLTGRDPS AHEGISAHQS IHTLARALTA AGAAYQPAAS SDGMGADGGL SLTSLVLSDG AWRDGGPGDP GQAAGLAALA LSLLTPQIPL IFDETARDID RAHFVQSALA VRAKLIAPRL SDCRPQAAHA LKADGDGDAD ALCASWRLAD DETLTIALNL SPDAVPFDAP GGRVVFETPA RARDRVDEGE LPPYSLVAWL TGDVNRYALT HDVRRLDDGS WRGMRPNLNA
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