Gene Bcen2424_3833 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_3833 
Symbol 
ID4451772 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008543 
Strand
Start bp698221 
End bp699687 
Gene Length1467 bp 
Protein Length488 aa 
Translation table11 
GC content73% 
IMG OID639695891 
Productmajor facilitator transporter 
Protein accessionYP_837463 
Protein GI116691930 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00711] drug resistance transporter, EmrB/QacA subfamily 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.289875 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGTCG CCGCCTACGA TGGACGCATG GATACGACCA CACCGTCCCC CGCTTTCCCG 
CCCGCGCTGG CGCGCATCGT CGCCACCGTC AGCATCGGGT TCGTCGTCAC GCAGCTCGAC
GTGACCATCG TCAATATCGC ACTCGCGCAT CTCGCCGCCG ATCTGCACCT GCCGGTGGCC
GGCCTGCAAT GGGTCGTCGA TGCGTACACG CTCGCGTTCG CGGTGCTGAT GCTGTCGGCC
GGCGCGCTCG GCGACCGCTT CGGCACACGC CGCCTGTATG TCGCGGGCCT CCTGCTGTTC
GCGTTCGCGT CGCTCGCGTG CGGCGCCGCC GTCGCGCCCG CGATGCTGAT CGCGGCCCGC
GCGCTGCAAG GCGTCGGCGC CGCGGCCATG CTGCCCAATT CGCTCGCGCT GCTCAACGAC
GCGTGCCGGC ATGACCCGCG CCTGCGCGCC CGTGCGGTCA GCGGGTGGAC GGCGGCCGGG
TCGATCGCGA TCGCGGCCGG CCCGGTCGTC GGCGGCCTGC TGATCGCCGC GTGGGGCTGG
CGCGGCATCT TCCTCGTGAA CCTGCCGCTG TGTGCGGCGG GGCTCGCCGC CACGTTCGCG
TGGGTGCCGG CGCGCCGCGA GCAGGCTGCC CCGGCGCGCT CGACCCGTTC GCTCGATCCG
CGCGGCCAGT TCATCGCGAT CGCGATGCTG ACCGTGCTGA CCGGCGCCGT GATCGAATGG
CGGCCGCTCG GCTTCACGCA TCCCGTCGTG GCCAGCGGTT TCGTGCTGGC GGCGCTGGCC
GCGCTCGCGT TCGTCGCGGT CGAATCGCGT ACGGCCACGC CGATGCTGCC GCTGTCGCTG
TTCCGCCACC CTGCGTTCAG CACGGCCGTG CTGTTCGGGA TCTGCGTGAA CCTCACGTAC
TACGGCACCG TGTTCGTGCT CGCGCTGTAC CTGCAACGCG CACGCGGCGA ATCGGCGTTG
CAGGCCGGGC TCGCGTTCCT GCCGCTCACC GGCGGCTTCC TGCTGTCGAA TCTCGCGAGC
GGACGCGTCG TCGCCCGCCA CGGCCCGCGC GTGCCGATGG TGGCCGGCGC GCTCGTCGCC
GCGCTCGGCT ACGGGTCGCT GCATTTCGTC GATGCCGCGA CGCCGCTCGG CGTGCTGCTG
GTGCCGTTCC TGCTGATTCC GTCGGGCATG GGCTTCGCGG TGCCCGCGAT GACGACGGCC
GTACTCGCCT CGGTCGCGCC CGAGCGGGCC GGCATCGCGT CGGCCGTGCT CAATACCGCG
CGGCAGGCCG GCGGCGCGAT CGGCGTCGCG GCGTTCGGTG CGCTCGCCGG CGGCGGCGGT
GCAGCGCAGG TCGTCAGCGG GTTGCGGATC GAAACCGTCG TGTCGGTCGC GCTGCTGGTC
GCGGCCGCGC TGCTCGCGAC CCGCGTGCGG ACCGATGCGG ATCGCGGTGC GCCGCGGTCG
CGTCAGACCT TGTCGGCGCA CGATTGA
 
Protein sequence
MSVAAYDGRM DTTTPSPAFP PALARIVATV SIGFVVTQLD VTIVNIALAH LAADLHLPVA 
GLQWVVDAYT LAFAVLMLSA GALGDRFGTR RLYVAGLLLF AFASLACGAA VAPAMLIAAR
ALQGVGAAAM LPNSLALLND ACRHDPRLRA RAVSGWTAAG SIAIAAGPVV GGLLIAAWGW
RGIFLVNLPL CAAGLAATFA WVPARREQAA PARSTRSLDP RGQFIAIAML TVLTGAVIEW
RPLGFTHPVV ASGFVLAALA ALAFVAVESR TATPMLPLSL FRHPAFSTAV LFGICVNLTY
YGTVFVLALY LQRARGESAL QAGLAFLPLT GGFLLSNLAS GRVVARHGPR VPMVAGALVA
ALGYGSLHFV DAATPLGVLL VPFLLIPSGM GFAVPAMTTA VLASVAPERA GIASAVLNTA
RQAGGAIGVA AFGALAGGGG AAQVVSGLRI ETVVSVALLV AAALLATRVR TDADRGAPRS
RQTLSAHD