Gene Bcen2424_3804 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_3804 
Symbol 
ID4452296 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008543 
Strand
Start bp666572 
End bp667360 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content69% 
IMG OID639695862 
Productshort chain dehydrogenase 
Protein accessionYP_837434 
Protein GI116691901 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.101152 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAATCC TTTCTCCGCG CCTCGCGGGC AAGTGCGCAT ACATCACGGG CGCCGCGGGC 
GGCCTCGGCC GCGCGATCGC GCGCCGCATG GTCGAGCAGG GCGCGCGCGT GTTCGTGACC
GACATCGCGG AAGCGGCGGT GCTCGACGCG TTCGCGCAGG AACTCAACGC AGGTCACGCG
ACGCCGGTCG CGTTCGCCGC GACCCAGGAC GTGCGCGACG AAGCCCGCTG GCAGGCGCTG
CTCGCGCAGG CGACCGATGC GATGGGCGGC CTGTCGGTGC TCGTCAACAA CGCGGGCGTC
GGCTCGATCG GTTCGCCCGC GCAAATCGAG CTGGACGAAT GGCGGCGCGT GATGGCGATC
AACGTCGAAA GCATCGTGCT CGGCTGCAAG CATGCGCTGT CGTATCTGGC CGAGAGCTAT
CCCGCGTCGA TCATCAACAT CTCGTCGGTC GCCGCGTTCA AGGTCGAGCC GGATTTCACC
GCGTACAACG CATCGAAGGC GGCGGTCGCG TCGCTGACGA AGTCGGTCGC GATCGACTGT
GCGCGCCGCG AGATCGACGT GCGCTGCAAT TCGATTCACC CGGCGTTCAT TCGCACGGGG
ATCGTCGAGC CGCTGTTCCA GTCGCTCGGC GAACGCGACG CGACCCGCAA GCTCGCGCGC
GGCATTCCGC TGCGCCGGCT CGGCGAGCCG GACGACGTCG CGCATGCGGC CGTGTATCTC
GCGTCCGACG AGAGCCGCTT CGTGACGGCC GCCGAACTCG TGATCGACGG CGGCATGTGC
GCGGTCTGA
 
Protein sequence
MTILSPRLAG KCAYITGAAG GLGRAIARRM VEQGARVFVT DIAEAAVLDA FAQELNAGHA 
TPVAFAATQD VRDEARWQAL LAQATDAMGG LSVLVNNAGV GSIGSPAQIE LDEWRRVMAI
NVESIVLGCK HALSYLAESY PASIINISSV AAFKVEPDFT AYNASKAAVA SLTKSVAIDC
ARREIDVRCN SIHPAFIRTG IVEPLFQSLG ERDATRKLAR GIPLRRLGEP DDVAHAAVYL
ASDESRFVTA AELVIDGGMC AV